Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2644 |
Symbol | |
ID | 1184296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2937426 |
End bp | 2938205 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394013 |
Product | MltA-interacting protein |
Protein accession | NP_792452 |
Protein GI | 28869833 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0158606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACT TTTTCCTTCC CGCACTGACC GTTGTTGCTT TTCCTGCCCT GTCGTTGCCG TTTGCCCACG CTGAACCGGG CGATTTCAGC CTGGGCCTGG GCGCGGCAAT CAGCGAAAGC CCTTATGCAG GCGTCGGCAC ACAGGTCAAC CCGATTCCGT TGATTAAATA TGAAGGCGAA CGTTTTTACG TGAACGGCGT AACCGCGGGT TATCACCTGA TCAACACCGA GTCGTTCTCC CTCGATGCCA TTGTTGCCCT GCAGATGGAC GGCATCGATC GTGACGACTT CGGTCGCCGC GAACTGGCCA GAAACGGCAT CGACCGCGAC CTGCTGGAAG ACCGCGACAA TGGCATCGAC GCAGGCTTGG CCGCCAAACT GCGCGGCGCT GCCGGCCAGC TTGAAGGGGT CGCCAAAAAC GACATCAGCG GTGCCAGCGA TGGCTACTCG CTGAACCTTG AATACGCGTA CCCCTTCACC TGGGGCAAAA CCCGCTTCAA GCCCAACATC GGTGCCACCC ATATGTCTGG CAACCTGGTG AATTACTACT ACGGTACGCT GAAAGAAGAA GAGCAACGCG GCATTGCCCG GTACCGTCCA GGCAGCGCCA CGGTGTCCTA TGCCGGTCTC GGTTTTTCCC GGTCCATCGG CAAACAGTGG GAAGTCTCGG GCAACCTGCG CTACAGCGCA CTGCCGGATG AACTGAGCGA CAGCCCGCTG GTGGAGCGTG ACACGGACAG TTCCACGTCG ATGTTTATCG GCATATCAAG AAAGTTCTGA
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Protein sequence | MKHFFLPALT VVAFPALSLP FAHAEPGDFS LGLGAAISES PYAGVGTQVN PIPLIKYEGE RFYVNGVTAG YHLINTESFS LDAIVALQMD GIDRDDFGRR ELARNGIDRD LLEDRDNGID AGLAAKLRGA AGQLEGVAKN DISGASDGYS LNLEYAYPFT WGKTRFKPNI GATHMSGNLV NYYYGTLKEE EQRGIARYRP GSATVSYAGL GFSRSIGKQW EVSGNLRYSA LPDELSDSPL VERDTDSSTS MFIGISRKF
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