| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2639 |
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| Symbol | |
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| ID | 1184291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2932726 |
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| End bp | 2934249 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394008 |
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| Product | L-arabinose ABC transporter, ATP-binding protein |
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| Protein accession | NP_792447 |
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| Protein GI | 28869828 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0558785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAGG CTATCGAGCA AACAGCCACA GGCGGTGCCT TGCGCTTCAA TGGCATCTGC
AAGGTATTTC CCGGCGTCAA GGCGCTTTCG GACATCAGCT TCGAGGCCCG CCCTGGCAGT
GTCCATGCGC TGATGGGGGA GAACGGCGCA GGCAAATCCA CGCTGCTGAA GATTCTGGGC
GGCTCTTATC AGCCCAACAG CGGCACCCTG CAGATCGGTG AGCACAGCTA TCAATTCAAA
TCCACCGCCG AGAGTATCGC GGCGGGTGTG GCGGTGATTC ATCAGGAGCT GCATCTGGTG
CCGGAAATGA CCGTCGCCGA GAACCTGCTG CTCGGGCACA TGCCTAATCG TTTCGGCTTG
ATCAATCGTG GCGCCATGTA CCGTCGAGCC GGTGAGCTGC TCAAAGGTCT GGCCGACGAG
ATCGACCCGC GCACGCGCTT GGGCGACCTG TCGCTGGGCC AGCGGCAACT GGTGGAAATC
GCCAAGGCCA TGTCGCGCAA CGCTCATGTC ATCGCGTTCG ACGAACCCAC CAGCAGCCTG
TCGGCGCGCG AGATCGACCG TTTGATGGCG ATCATCGTGC GGCTGCGGGA TGAGGGGCGG
GTGATTCTGT ATGTGTCGCA TCGTATGGAA GAAATCTTCC GGGTCTGCGA TGCCGTGACC
GTCTTCAAGG ACGGGCGCTT TGTCAAAACC TTCGAGCAGA TGGCTGATCT GGACCACGAC
CGGCTGGTGA CTTGCATGGT CGGTCGCGAT ATTCAGGACA TCTACAACTA TCGTCCACGT
CAGCATCAGG GGCCGAGCCT GCGGGTCACC GGTCTGTTGG GGCTGGGCTT GCAGGAGCCA
GTGAGTTTCG CCGTGCAGAA AGGCGAGGTG CTGGGCTTTT TCGGTCTGGT GGGCGCAGGT
CGTACCGAGC TGTTTCGCAT TCTTTCCGGG CTGACGCGCA GTACCGCCGG CAGCCTGCAA
CTGGACGGTC AGCCGCTGAC TTTGAAGTCG CCACGTGATG CCATTGCGGC CGGGGTGCTG
CTCTGCCCGG AAGACCGCAA GAAAGAAGGC ATCGTGCCGC TGTCCAGCGT CGCGGAGAAC
ATCAACATCG GTGCGCGGCC CCGGCATGTG AATCTTGGCT GCCTGATCCA GGGCGGCTGG
GAGCGGGACA ACGCGCGTGC TCAGATCAAG TCGATGAACG TCAAGACGCC ATCGCCCGAG
CAACAGATCA TGTTTCTGTC CGGCGGTAAT CAGCAAAAAG CCATTCTCGG TCGCTGGCTG
TCGATGCCGA TGAAAGTCCT GCTGCTGGAC GAGCCGACCC GCGGGATCGA TGTCGGAGCC
AAATCCGAGA TCTACGAGAT CATTCACACA TTGGCCGCCG ATGGCATTGC CGTGATCGTG
GTGTCCAGCG ACCTGATGGA AGTCATGGGC ATTTCCGATC GTATTCTGGT GATGAGTGAA
GGCGCCATTA CCGGTGAACT CAACCGCGAC GAGGCTGACG AGTCGCGACT TCTGCAATTG
GCTCTGCCAC GCACGCGCGG CTAA
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| Protein sequence | MQQAIEQTAT GGALRFNGIC KVFPGVKALS DISFEARPGS VHALMGENGA GKSTLLKILG
GSYQPNSGTL QIGEHSYQFK STAESIAAGV AVIHQELHLV PEMTVAENLL LGHMPNRFGL
INRGAMYRRA GELLKGLADE IDPRTRLGDL SLGQRQLVEI AKAMSRNAHV IAFDEPTSSL
SAREIDRLMA IIVRLRDEGR VILYVSHRME EIFRVCDAVT VFKDGRFVKT FEQMADLDHD
RLVTCMVGRD IQDIYNYRPR QHQGPSLRVT GLLGLGLQEP VSFAVQKGEV LGFFGLVGAG
RTELFRILSG LTRSTAGSLQ LDGQPLTLKS PRDAIAAGVL LCPEDRKKEG IVPLSSVAEN
INIGARPRHV NLGCLIQGGW ERDNARAQIK SMNVKTPSPE QQIMFLSGGN QQKAILGRWL
SMPMKVLLLD EPTRGIDVGA KSEIYEIIHT LAADGIAVIV VSSDLMEVMG ISDRILVMSE
GAITGELNRD EADESRLLQL ALPRTRG
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