| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2629 |
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| Symbol | |
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| ID | 1184281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2921165 |
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| End bp | 2921953 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393998 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | NP_792437 |
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| Protein GI | 28869818 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0506299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATTG ACTCGTCACT CGCCACGCCG CCCGCCTGGC CGCGTCGCCG CCTGGTTACA
GTGAGCCTGG CAGTGCTGTT GGTGAGCGCG CTGTTTTATT GGGCGTCTGG ACGCCCGATA
TTCAACGCTT TGGTGCAGTG GTCGCCCGCA CTGGCGGGCG GTTTTGCGCA GAACATTCTG
ATCAGCCTGG TTGCCATCGG CCTGGGCTCG GTGTTCGGTC TGCTGGTCGG GGCGCTGGGG
CTTTCGCCGT TCCGCTTGCT GCGTTTGCCA GCGCGTCTGT GGGTGCAGGT CTTTCGTAAT
GCGCCGTGGC TGGTGTTGAT CTACTTCACC ACTTATGTGT TCCCATTCGA GATCAAGATT
GCCGGAACCT ACATCGCCTT TCCTGACTGG GTGAAAGTCA CCCTCGGCCT GGCATTGCCT
GCCAGCGCCA ATGTGGCCGA GATCTTTCGC GGCGCAGTGG CCTCTATCCC CAGCACCCAG
TGGGAGGCTG CACGTTCGCT GGCCTTCACG CGGGGGCAGA TTTTTCGCTC GATCATCCTG
CCGCAGTGCT TCAAACGCAT GTTGCCGCCG TGGATGAACC TGTACGCGGT GATCACCATG
GGCACGGCGC TGGCGTCGCT GGTGGGCGTG CATGATGTGA TCGATACCGC GCAGATTGCC
AGTAACACGG TCAACCAGAC CGGTTTCACG GTGGTTATCT ATTGCAGCCT GCTGGTGCTG
TTCTTCGCTT ATTGCTACCC CATTTCCCGT CTGACTCACT ACCTGGAGCG ACGCTATGCC
TTCCATTGA
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| Protein sequence | MAIDSSLATP PAWPRRRLVT VSLAVLLVSA LFYWASGRPI FNALVQWSPA LAGGFAQNIL
ISLVAIGLGS VFGLLVGALG LSPFRLLRLP ARLWVQVFRN APWLVLIYFT TYVFPFEIKI
AGTYIAFPDW VKVTLGLALP ASANVAEIFR GAVASIPSTQ WEAARSLAFT RGQIFRSIIL
PQCFKRMLPP WMNLYAVITM GTALASLVGV HDVIDTAQIA SNTVNQTGFT VVIYCSLLVL
FFAYCYPISR LTHYLERRYA FH
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