Gene PSPTO_2621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2621 
SymbolpolB 
ID1184273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2911958 
End bp2914321 
Gene Length2364 bp 
Protein Length787 aa 
Translation table11 
GC content61% 
IMG OID637393991 
ProductDNA polymerase II 
Protein accessionNP_792430 
Protein GI28869811 
COG category[L] Replication, recombination and repair 
COG ID[COG0417] DNA polymerase elongation subunit (family B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00407821 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGTTAC AGCAGGGCTT TATCCTGAGT CGGCACTGGC AAGACACGCC CGCCGGGACA 
GAAGTCGACT TCTGGTTGGC CACTGATCAC GGTCCTCGCC ACATTCGTTT GCCTTGCCAG
CCCTCTGTCG CTTTTATTCC TGCTGAGCAG GGTGAGCGCG CGCAGTCGTT GTTGCGTACC
GAGCGTGGAG TCGATTTGCG CCCGCTGGAA CTCTGCGATT TCCGCCATCG ACCGGTGCTG
GGGGTGTACT GCCAGCAGCA TCGACAGCTG ATGAACGTCG AAAAACTGCT GCGCAGAGGC
AACGTGGACG TCTACGAAGC CGACATTCGC CCGCCTGAAC GCTACCTGAT GGAGCGCTTC
ATCACCGCGC CCGTGCAGTT CGGCGGCACG CCCAATGCCG ATGGTGTGCT CTGTGACGCG
CAGATAAGGC CGGCAGCGGA TTACCGGCCC AGGCTGAAAC TGGTGTCGCT GGACATCGAA
ACCACGGCGC GGGGCGAGTT GTATTCCATT GCGCTGGAGG GCTGTGGCCA GCGCCAGGTG
TATATGCTCG GCCCGGCCAA TGGTGGCGAC GAGGCGCTGG ATTTTCAGCT CGACTATTGC
GACACCCGCG CGCAGTTGCT CGAGCGTCTG AACGACTGGC TGGCGCTGCA CGACCCCGAC
GCGATCATTG GCTGGAACGT GGTGCAGTTC GACCTGCGGG TCTTGCACGA ACATGCTCAG
CGCCTGCAGG TGCCGCTGCG GCTCGGGCGT GGCGGGGAAG CGATGGGCTG GCGTGAGCAT
GGCAGCCGCA ACAACCACTT TTTCGCCGAA GTCAGCGGGC GGCTGATCAT TGACGGTATC
GAGGCACTGC GCTCGGCGAC CTGGAGCTTT CCCTCGTTCA GCCTTGAGAA TGTCGCGCAA
ACCTTGCTGG GCGAAGGCAA GGCCATCGAC ACGCCGTATC AGCGCATGGA CGAAATCAAC
CGCATGTTCG CCGAGGATAA GCCGGCACTG GCACGTTACA ACATCAAGGA CTGCGAGTTG
GTGACGCGTA TCTTCGCCAA GACCCAGTTG CTGACCTTTC TGCTTGAACG CGCCACCGTG
ACCGGTTTGC CTGCCGACCG CAGCGGTGGC TCGGTGGCCG CCTTCTGCCA TTTGTATATT
CCGCTGATGC ACCGTCAGGG CTTTGTCGCG CCCAATCAGG GCGAACGCTT GCCTGAAGCC
AGCCCCGGTG GCTTTGTGAT GGATTCGCAG CCGGGGCTGT ATGAATCGGT GCTGGTGCTG
GACTACAAAA GCCTTTATCC GGCAATCATC CGCACTTTTC TCATCGATCC GGTGGGCCTG
ATCGAAGGCA TGCGCCAGCC TGGAGACAGC GAATCGGTGC CCGGTTTTCG CGGCGCACGC
TTTTCTCGCA CGCGGCACAG CCTGCCGGCC ATCGTCGAGC GTGTCTGGCA GGGCCGGGAG
GCAGCCAAAC GTGAGCACAA CGCGCCGCTG TCCCAGGCCC TTAAAATCAT CATGAACGCC
TTTTATGGCG TGTTGGGGTC CAGCGGTTGC CGGTTTTTCG ATCCACGGCT GGCTTCGTCC
ATCACCCTGC GCGGACATGA AATCATGCTC AAGACCCGCG ACCTGATTCA GGCGCAGGGC
TACACCGTGA TTTACGGCGA CACTGACTCG ACCTTCGTCT GGCTGGGACG CCCGCACGGG
CAGGAAGAAG CGGCAGGGAT CGGCAAAGCG CTGGTGCAGC AGGTCAATCA GTGGTGGCGC
GAGCACTTGC AGAACGAATA TGGCCTGCAG AGCGCCCTTG AACTGCAGTA CGAAACACAT
TTTCGACGTT TTCTGATGCC GACCGTGCGC GGCGCGGAAG AGGGCAGCAA GAAGCGCTAC
GCCGGGCTGG TCACACGCGC CGACGGTGCT GAGGAAATGA TCTACAAAGG TCTGGAAACG
GTGCGCACCG ACTGGTCGCC ACTGGCCCAG CGGTTTCAGC AGGAACTGTA CCTGCGCATT
TTCAAGCGCC AGCCGTATCA GGATTATGTG CGTGATTACG TGCAGCGCAC CCTGTCAGGC
GAGCTGGATG ATCTGCTGAT CTACCGTAAG CGCCTTCGAC GCAAGCTTGA TGACTACCAG
CGCAACGTGC CGCCGCATGT GCGTGCTGCG CGTCTCGCCG ACGAGTACAA CGACCAGCAG
GGCCGACCCC GGCAGTATCA GAGCGGCGGC TGGATCAGCT ACGTGATGAC CACCGTGGGG
CCGGAACCGC TGGAAATTCG TCATGCGCCG ATTGACTACG ATCACTACGT GACGCGCCAG
CTGCAACCGC TGGCCGATGC CATCCTGCCC TTTGTGGACG ATGATTTCAG CACGTTGATC
GGTGGGCAGC TCGGGCTTTT TTAG
 
Protein sequence
MELQQGFILS RHWQDTPAGT EVDFWLATDH GPRHIRLPCQ PSVAFIPAEQ GERAQSLLRT 
ERGVDLRPLE LCDFRHRPVL GVYCQQHRQL MNVEKLLRRG NVDVYEADIR PPERYLMERF
ITAPVQFGGT PNADGVLCDA QIRPAADYRP RLKLVSLDIE TTARGELYSI ALEGCGQRQV
YMLGPANGGD EALDFQLDYC DTRAQLLERL NDWLALHDPD AIIGWNVVQF DLRVLHEHAQ
RLQVPLRLGR GGEAMGWREH GSRNNHFFAE VSGRLIIDGI EALRSATWSF PSFSLENVAQ
TLLGEGKAID TPYQRMDEIN RMFAEDKPAL ARYNIKDCEL VTRIFAKTQL LTFLLERATV
TGLPADRSGG SVAAFCHLYI PLMHRQGFVA PNQGERLPEA SPGGFVMDSQ PGLYESVLVL
DYKSLYPAII RTFLIDPVGL IEGMRQPGDS ESVPGFRGAR FSRTRHSLPA IVERVWQGRE
AAKREHNAPL SQALKIIMNA FYGVLGSSGC RFFDPRLASS ITLRGHEIML KTRDLIQAQG
YTVIYGDTDS TFVWLGRPHG QEEAAGIGKA LVQQVNQWWR EHLQNEYGLQ SALELQYETH
FRRFLMPTVR GAEEGSKKRY AGLVTRADGA EEMIYKGLET VRTDWSPLAQ RFQQELYLRI
FKRQPYQDYV RDYVQRTLSG ELDDLLIYRK RLRRKLDDYQ RNVPPHVRAA RLADEYNDQQ
GRPRQYQSGG WISYVMTTVG PEPLEIRHAP IDYDHYVTRQ LQPLADAILP FVDDDFSTLI
GGQLGLF