Gene PSPTO_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2620 
Symbol 
ID1184272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp2911293 
End bp2911733 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content56% 
IMG OID637393990 
ProductCBS domain protein 
Protein accessionNP_792429 
Protein GI28869810 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00014001 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCG TTGCCCAACT GCTGAAATTG AAAGACCTGC ACAACCAGCA CGTGCATACC 
ATTGGCCCGA ATCAGATGGT GCTCGATGCA CTCAGGCTGA TGGCGGACAA AAATATCGGG 
GCGCTGCCAG TGGTGGAAAA CGGCACGGTG GTCGGTGTAG TCAGCGAGCG CGACTATGCA 
CGCAAGGTGG TGCTCAAGGG GCGTTCGTCG GTGGGCACGC CGGTCAGTGA GATCATGAGC 
AGCAAAGTCA TTACCGTCGA CTCGCAACAG ACCGTGGAAA CCTGCATGGG CATTATGACC 
GACAGCCATT TACGCCATTT GCCGGTTGTC GAAGACGGTC AGTTGTTGGG GCTGCTGTCC 
ATCGGCGACC TTGTGAAGGA AGCCATCGCC GAGCAGGCCA GCCTCATTCA GCAGCTTGAA 
CAATACATTC GCGGCGAGTA A
 
Protein sequence
MKTVAQLLKL KDLHNQHVHT IGPNQMVLDA LRLMADKNIG ALPVVENGTV VGVVSERDYA 
RKVVLKGRSS VGTPVSEIMS SKVITVDSQQ TVETCMGIMT DSHLRHLPVV EDGQLLGLLS 
IGDLVKEAIA EQASLIQQLE QYIRGE