| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2617 |
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| Symbol | |
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| ID | 1184269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2908370 |
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| End bp | 2909275 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637393987 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_792426 |
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| Protein GI | 28869807 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000166311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTTGT TTCTGGCGAT GCGCGTGTAT GTAAAGGTTG TCGAAACCGG CAGCCTGACG
GCAGCGGCGC AGGCATGCTC GATTTCCACA ACGATGGTCG GCAATCACTT GCGCGCGCTG
GAACAGCGCC TGGGCGTCAG CCTGTTGCAG CGCACTACTC GCCGCCAGCG GTTGACCGAG
TTCGGCACTG CGTATTACCA GCGATGCCTT GAGGTGCTGG GGCTGGTGGC GCAGTCCGAG
CAACTGGCCG AGCAGGCGCA GGGCGAGCCG ACCGGCACGT TGCGCATCAC CGCACCTCTG
ACCTTCGGCT CGGAGCTGCT GGCCCCTGCC CTGGTCGGGT TCTCGCAGCG CTTTCCCGAC
GTCAAACTCG ACCTGGTGCT GACCAACCAG CGCCTCGACA TGATCGACAA CGGTTTCGAC
GTCGCCATTC GCCTGGGCAA CCTTGCGCAA TCATCGCCCT TGATTGCCCG CCCGTTGCAG
GACTACACCC TGACCATCTG CGCTGCACCT GATTACCTCG CTCGGCACAG CGCGCCCACC
CGGCCCGAAG ACCTTCGCGC GCACAATTGC CTGGCGTTCG CCTACCCGGC CGGCGATGAG
TGGCGCACAG CAGGCACGCA ATGGCGCATG ACCGGGCCCG AAGGCGAGGT TCTGGTGGAC
GTGGACGGCT CGATGGTGGC CAACACATCA GCCGGTCTTT ATCAGGCGGC GCGCGCCGGG
ATGGGTGTGG TGATGCTGCC GGATGCGCTG GTCCAGCGTG ACTTGCAGGA GGGCCGACTG
GTAGCGCTGT TGCCGGACTA TCACCTGCCC AGACGGCCGA TGAACCTGCT GTATGTGCAA
GACCGTTACC GGCTGCCCAA GCTGAGAAGC TTTGTGGAGT TTGCGACAGC GCTATGGGGG
CGATAG
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| Protein sequence | MDLFLAMRVY VKVVETGSLT AAAQACSIST TMVGNHLRAL EQRLGVSLLQ RTTRRQRLTE
FGTAYYQRCL EVLGLVAQSE QLAEQAQGEP TGTLRITAPL TFGSELLAPA LVGFSQRFPD
VKLDLVLTNQ RLDMIDNGFD VAIRLGNLAQ SSPLIARPLQ DYTLTICAAP DYLARHSAPT
RPEDLRAHNC LAFAYPAGDE WRTAGTQWRM TGPEGEVLVD VDGSMVANTS AGLYQAARAG
MGVVMLPDAL VQRDLQEGRL VALLPDYHLP RRPMNLLYVQ DRYRLPKLRS FVEFATALWG
R
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