| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2612 |
|---|
| Symbol | |
|---|
| ID | 1184264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 2903125 |
|---|
| End bp | 2903628 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637393982 |
|---|
| Product | acetyltransferase, GNAT family |
|---|
| Protein accession | NP_792421 |
|---|
| Protein GI | 28869802 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000687375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCACGCTC CTGCCCCGCA AATCGTCATT CAGCGCATGG CTGAAACCCA CCTTGAAGGT
GTGACCGCGC TCTACAACGA GCCAGCGGTC TGCCGTCAGG TTTTGCAAAT GCCTTATCAG
TCCATCGAGG TCTGGCGCCA ACGCCTGGCC AACAGCACTG AACGACAGGT AAAACTGGTC
GCGCTGAACG GCGGCGAGGT GATCGGCAGC ATCGGCCTGG AACAATACTC ACGCAGCAGG
CAAAGCCATG TCGGCGCGTT CGGCATGGGC GTCGCCTCGG CCTGGCACGG CAAAGGCATT
GGCTCGAAGT TGCTGGCAGC GGCGCTGGAC GTGGCAGATA ACTGGATGAA CCTGCACCGG
GTAGAACTGA CCGTGTATGC CGACAATGAG GCCGCACAAG GTCTCTATCG CAAGTTTGGT
TTTGAAGTCG AAGGCCGTCT GCGCAACTAC GCGGTACGCG ATGGCGCATA TGTCGATGCC
TTGAGCATGG CGCGCCTGAG ATAA
|
|---|
| Protein sequence | MHAPAPQIVI QRMAETHLEG VTALYNEPAV CRQVLQMPYQ SIEVWRQRLA NSTERQVKLV
ALNGGEVIGS IGLEQYSRSR QSHVGAFGMG VASAWHGKGI GSKLLAAALD VADNWMNLHR
VELTVYADNE AAQGLYRKFG FEVEGRLRNY AVRDGAYVDA LSMARLR
|
|---|
| |