Gene PSPTO_2609 details

Gene Information

• Locus tag: PSPTO_2609
• ID: 1184261
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 2900955
• End bp: 2901443
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637393979
• Product: hypothetical protein
• Protein accession: NP_792418
• Protein GI: 28869799
• COG category: [S] Function unknown
• COG ID: [COG2847] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0189844
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGTTC TGATTCGTAA CGCCGTAAAG CCACTGTTGC TGACCCTTTC GCTGCTCGGT 
CTGAGCGCTC AGGCGCTGGC CGACACCAAA GTCGATGATG CCTGGGTGCG TGCCACCGTG 
CCGGGCCAGC CTGCCACAGG CGCGTTCATG CACATCACGT CCAGCACCGA CAGCAAACTG 
GTGGACGTTA CATCACCTGT TGCCAAAACC GTGCAGATCC ACCAGATGAG CATGAAAGGC 
GATGTGATGA GCATGCAGCG TGTCAGCTCG GTCGACCTGC CGGCGGGCAA ACCGGTGGTG 
TTCGATGCCA ACGGCTACCA CGTCATGTTC ATGGGCCTGT TGGCGCAGGT CAAAGAGGGC 
GACAAGGTGC CACTGACCCT GATCGTTGAA GATGCCAAGG GAGTGAAGGA GTCGATTCAG 
GTTACCGCAG TGGCCAAATC GCTGACCACT GACGAACACG GCGGGCACGG TGACCACAGC 
GGTCATTGA 

 

Protein sequence

MTVLIRNAVK PLLLTLSLLG LSAQALADTK VDDAWVRATV PGQPATGAFM HITSSTDSKL 
VDVTSPVAKT VQIHQMSMKG DVMSMQRVSS VDLPAGKPVV FDANGYHVMF MGLLAQVKEG 
DKVPLTLIVE DAKGVKESIQ VTAVAKSLTT DEHGGHGDHS GH