| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2605 |
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| Symbol | |
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| ID | 1184257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2894373 |
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| End bp | 2896430 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393975 |
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| Product | TonB-dependent siderophore receptor, putative |
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| Protein accession | NP_792414 |
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| Protein GI | 28869795 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGT TAAGTCCAGA GAATACGGCC ACTCCCTTTC ACCCGAGTCT TTTCATGCAA
CGTTCCCTAC TCAGCCTGGC AATCATGCTC GCGGTTTCCC ATCAGGCGCT GGCCGATAAT
GTAATGACCT TGCCTGACAT GCAGGTAACG GCCGGCAAGC GCGTGCAGTC TCAGGACCAG
ACCGACCTGG CGTTGTCGGT GGCAAGCCAG GCGGATCTGG AACGCGCCAA TGTCTATGCC
AGCGGCGACC TGGAGAGAGT ATTTCCGGAA CTATTGATGC GCAACACCGG CGCAAGCGTA
TTCCCCAGCC TGAGCCTGCG CGGCGTTTCA TCTTCTGACC CCTACAATGC GCCTGTCGGC
ATTTATGTCG ATGGTGTGCC GCAATACCTG GGCACCTTCA ATCAGCAACT GCTCAACATC
GAACACATCG AACTGCTCAA AGGCCCGCAA GGCACGCTTT ACGGGCGTAA TGCCCACGCC
GGGGCACTGA ATATCCTCAC CCGTCAGCCG GACAACACGC CGACCGCCAC GCTGCAAAGC
CGCTTCAGCA ATCTGCACCA ACAAGTATCG GCGACCGGCT CGACGCCGCT GGTGGACGAC
AAACTGTTCA TACAGGGCAC CGTGTATCAC GACGACACCG ACGGCGAGCT GACCCGCAGC
GAGCATCACG GCGACAGCGA CAACGGGGGC GGCAATGTCG GTCTGACCTT CAAGCCCAAC
GAAGACTTCA GCCTCAAGCT GGCCTATGCC CGTGATCGCC TGACCTCCTA CAACGAGCAG
TATCTGGCAG ACGCCACGTA TGAAAAGCGT CGGGCAAGTG TTCCGCTGCT GGAGTCGGTC
TATGTGCGCC GCGTGGAAAC CAGCAGTGCA ACGCTGGACT GGAACCTCAG CGATGCGCTC
AAACTGACCT CCATCACCTC TTTGCAGAAC TATCGCCACG AGCGACTGTA CGGCGATCTG
GGTTTTCACT GGCCCGAAAC CCAGCGCACC GTCAGCCAGG AACTGCGTCT TTCCACTCAG
GGCGACGACC GTGCCTGGGA CGCGGTAGGT GGCCTTTACT GGCAGAAGAG CCGCAGCCAC
TCAGAGCGCG AAACTGACAG CAGCGCCCCG CTGTTCGGCG TGTATGGCGT GGCCGACAGC
CGCATCGATA GTTCCGAGAA AGCAGTGTTT GGCGAATTCA CCTGGCACCT GGCACCGCGC
TGGGACCTGA CACTGGGCGC GCGGCACAGC GTGGAAAAAG CCGAAACCGA TTACACCCAG
GTCGATGCAG CCTTTACGCC AGGCTTCGTT TACAGCGGTA ACGACACGTT CACCAGCACC
ACGCCCAAGA TTGCCCTGGG CTTCCAGGCG ACTCCGGACA TGCGGCTGTA TGCCTCGGTC
AGCAAGGGCT ATAAGGCCGG TGGCTACAAT CGTATTGGCG CCATTACCCC AGGTGCCGTG
GCGTATGCGC CGGAAAAATC GCTGAACACG GAGATCGGCG TCAAATCCAG CCTGTTCGAT
CAGCGCCTGT GGCTCAACGC CGCGCTGTAC CGCATCGATA TCGACGACGT GCAGCAATTC
ATCGGCGCCG CTGGCACCGG CACCCAGTCG CTGAGCAACA TCGGCAAGGC CCGCAGTGAA
GGTGCGGAGC TGTCCATGGA CTGGCATGCA GATGAGGCCA CCCTGATTCG TCTGGCGGGC
ACCGTCAACC GCAACCGCAT GCTTGACTCC GAACGCCAGG GCAACAGCCT GACCTACACG
CCCGGACGCA CCTTGCGCGC ATCGGCCGAA CACAGCTTCT ACTTCGACGG CCTGCTGGGC
GAGGTGCGAC CCAGCGTCGG GATCAGTTAC ACCGGCAAGC ATTATTTCGA CGTCGACAAC
GAGGTGTCGC AGGGCGGCTA TAGCCTGGTG GACGCCCGAC TGGCATGGCT GCCCACACCT
GATCTGGAGG TTGCGCTGTA CGGCAACAAC CTCGGCGACA AGGACTACCG CACCTATTCC
TATCTGTCTG GCGGCGCGCA GTTCAGCCAG CCCGGACAGG GCCGGGAACT GGGGCTGAGT
ACCAAAATCA GCTTTTGA
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| Protein sequence | MKRLSPENTA TPFHPSLFMQ RSLLSLAIML AVSHQALADN VMTLPDMQVT AGKRVQSQDQ
TDLALSVASQ ADLERANVYA SGDLERVFPE LLMRNTGASV FPSLSLRGVS SSDPYNAPVG
IYVDGVPQYL GTFNQQLLNI EHIELLKGPQ GTLYGRNAHA GALNILTRQP DNTPTATLQS
RFSNLHQQVS ATGSTPLVDD KLFIQGTVYH DDTDGELTRS EHHGDSDNGG GNVGLTFKPN
EDFSLKLAYA RDRLTSYNEQ YLADATYEKR RASVPLLESV YVRRVETSSA TLDWNLSDAL
KLTSITSLQN YRHERLYGDL GFHWPETQRT VSQELRLSTQ GDDRAWDAVG GLYWQKSRSH
SERETDSSAP LFGVYGVADS RIDSSEKAVF GEFTWHLAPR WDLTLGARHS VEKAETDYTQ
VDAAFTPGFV YSGNDTFTST TPKIALGFQA TPDMRLYASV SKGYKAGGYN RIGAITPGAV
AYAPEKSLNT EIGVKSSLFD QRLWLNAALY RIDIDDVQQF IGAAGTGTQS LSNIGKARSE
GAELSMDWHA DEATLIRLAG TVNRNRMLDS ERQGNSLTYT PGRTLRASAE HSFYFDGLLG
EVRPSVGISY TGKHYFDVDN EVSQGGYSLV DARLAWLPTP DLEVALYGNN LGDKDYRTYS
YLSGGAQFSQ PGQGRELGLS TKISF
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