| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2597 |
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| Symbol | irp5 |
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| ID | 1184249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2870283 |
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| End bp | 2871851 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637393967 |
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| Product | yersiniabactin synthetase, salycilate ligase component |
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| Protein accession | NP_792406 |
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| Protein GI | 28869787 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1021] Peptide arylation enzymes |
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| TIGRFAM ID | [TIGR02275] 2,3-dihydroxybenzoate-AMP ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACCG AACACACGTC TCACGACCCG CTGCACCCCT TCGCCGACCA GACCCTCCCT
CAACGCCTGC GTCGCTGGGC GAACCAGTAC GGCGCGCACA CCGCGCTGGT CGCAGGCGAC
GTACGCCTGA GCTACGCGCA GCTGGACCAG CGGGTTGATC GCCTGGCCGG GGGCCTTGCA
GCGCTGGGCA TTACGGCAGG TGACCGGGTC ATGCTGCAAC TGCCCAACGG TGTCGGCTTT
GTCTGCGCAT TGTTTGCCGT GATGCGCATC GGCGCGGTAC CGGTATTGGC CATGCCCACC
CAGCGTGCAG TGGACATTGC AGCGCTGTGC CGGTTGGCCG AACCTGTGGC CTACCTGATC
CCCGATCGCC TTCGGGACTT CGATTACCGG GGCATGGCAG CCGGCATCGT CGAGCAGCAG
CCCTCACTGG CGCACGTCAT TGTCGATGGC GAACCCGGGC CTTTCATCGC CTTGTCGGCG
CTGGATGCCC CCTGCCCGAC CGATCCGCTG GCCGACCCGC GCGGGCTGGC CTTGCTGCTG
CTTTCAGGCG GCACCACCGG CACGCCAAAA CTGATCCCGC GCAGCCACGC CGACTACGCC
TACAACTTTT CCCACTCGGC CAGGCTCTGT GAACTGGACA GCGATAGCGT GTACCTGGCC
GTGTTGCCGA CCGCGCACAA TTTCACCCTT GCCTGCCCCG GCGTGCTCGG CAGTCTGGCC
GCCGGTGCGA CGGTGGTAAT GGGCGACAGC GCCAGTTGTG ATGCGGCCAT GCCGTTGATC
GAGCGCGAAG GCGTCACCCA TGTGGCGCTG GTCCCGCCGC TGGCGCAACT CTGGGCCCAA
GGGCGCGACT GGGAGGACAG CGACCTGACC AGCCTGAAGC TGCTGCAAGT CGGCGGCTCG
CGACTGGACC CGGCACTGGC AGCCCACCTG CTTGAAGCGC TGGACTGCCA AATACAACAG
GTGTTCGGCA TGGCCGAGGG CCTGCTGTGC TACACCCGCC CGGACGATCC GCTGGAAGTG
GTGCTCAATA CGCAGGGCCG TCCATTGTCG CCGTTCGACC AGGTTCGTCT GGTGGACACC
GACCTGAATG ACGTTGCTCA TGGCCAGACC GGCGAACTGC TGACCCGCGG CCCCTACACC
ATTACCGGGT ATTACCGGGC GGCAGATCAC ACTGCGCGCA GTTTCACCGC CGATGGCTAC
TACCGCAGCG GCGACCTTGC GCGCTGGACG CCGCAAGGCA ACCTGATCGT CGAAGGGCGC
ATCAAGGAAC AGATTCAGCG CAGCGGTGAA AAGATCTCTG CGGCACACAT CGAAAATCAC
CTCACGGCGC TGCCCGACAT CGAATCTGCC GTCGTGGTGG CGGTGCCGGA TCCGCTGCTG
GGCGAACGCA TCTGCGCGTT CATTCTGGGC GACCCGCCAA CGGGTGCCGG CCAATGCATT
CGCGACCAAC TGCGTCGGCA GGGGCTGGGT GAAGACAAGC TGCCCGATCA GTTCGAGTGG
GTTGCCGCAT GGCCGCTGAC GGCCGTGGGC AAGATCGACA AACGCCAACT GGCCGCTCTG
GCCCAGTGA
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| Protein sequence | MHTEHTSHDP LHPFADQTLP QRLRRWANQY GAHTALVAGD VRLSYAQLDQ RVDRLAGGLA
ALGITAGDRV MLQLPNGVGF VCALFAVMRI GAVPVLAMPT QRAVDIAALC RLAEPVAYLI
PDRLRDFDYR GMAAGIVEQQ PSLAHVIVDG EPGPFIALSA LDAPCPTDPL ADPRGLALLL
LSGGTTGTPK LIPRSHADYA YNFSHSARLC ELDSDSVYLA VLPTAHNFTL ACPGVLGSLA
AGATVVMGDS ASCDAAMPLI EREGVTHVAL VPPLAQLWAQ GRDWEDSDLT SLKLLQVGGS
RLDPALAAHL LEALDCQIQQ VFGMAEGLLC YTRPDDPLEV VLNTQGRPLS PFDQVRLVDT
DLNDVAHGQT GELLTRGPYT ITGYYRAADH TARSFTADGY YRSGDLARWT PQGNLIVEGR
IKEQIQRSGE KISAAHIENH LTALPDIESA VVVAVPDPLL GERICAFILG DPPTGAGQCI
RDQLRRQGLG EDKLPDQFEW VAAWPLTAVG KIDKRQLAAL AQ
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