Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2595 |
Symbol | pchA |
ID | 1184247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2868541 |
End bp | 2869950 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637393965 |
Product | isochorismate synthase |
Protein accession | NP_792404 |
Protein GI | 28869785 |
COG category | [H] Coenzyme transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1169] Isochorismate synthase |
TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCGC TGCCATCATT CAGCGATCTG CAGGGATGTT TGACGGGAGG CCTGATGGAA TGCCTGCACA GCGCGCGGGC GCAGGTCAGC ACAGCCCGGC CTCGGGTACT GGCCTCGTTC TCCACGCCTT CACCACACGT GGAGCCGTTC GGGTTGTTCA CGGCCAATCG CGAGCAGGTC CAACCGGCCT GTCTGTGGCA CGTTCAGGCA CAAGGGCAAT ACCGTTTAGG CCTGGGCCTG GCCCATGAAT TCAACGCCGG GCCTGCAGAC AGTTGGCAAA CACTCGAGAA CCGCTGGCGG GACATGGCAG CCACTGCGGT GGTTCGCGGC GACCATCGCC CGACGCTGTT CGGCGGTTTT GCCTTCGACC GTCGGCAGCC CAGAACACGC CTGTGGCGCG ACTTTCCCGA CGCCGCGTTG ACGTTGCCGC GCTTTGAATT TCACGAGTCC GATGGCCAGA CCCGGTTGAT CGTCAATGTG CTGATTGACG AGCACAGCCA GTGCGCCGCA CTGGCAGAAG CGCTGGCTGG CGAATGGGCA GAAATTCTCG CCCGGCCTTT GCCTGGCGCA CCGGCAAGCG GCGATCAGTT CGTGCGTTTG TCGATGGCAC ACCTGTGGAA ACAGGACGTG TTTCACGCGG TAAACCGGAT CAAGCGTGGC GGGCTGGAAA AGGTCGTCCT GGCCCGCTCG CAGAATGTCG CAGCGGCCAG CCCTCTGGAA CAGGTCATGC AGCGCTTGAT GCACAAGCAG CCCAATGCCT ACCTGTTTGC TTTCGCGCGG GGCAGCAGTT GCTTCATGGG TGCATCACCC GAATGCCTGT TGACCGTGCG CGGTGATCAA TTGCACACCA TGGCCCTGGC AGGCACCGCA CCACGCGGGG CAAACTGCGC TGACGATGCG CGTCTGGGCG AGCAATTGCT GCTGAGCGAG AAAGACAACA GCGAACACGC CATGGTGATC GACTGCATCA GGCATGGCCT GGCTGAGCAC TGCCTGGTAC TGGACATCGC GTGCCGGCCG CGACTGCACA AACTGCCGCA TATCCAGCAT CTGCTGACCC CCGTTAAGGG CACCCTTGCT CCGAACGCCA GCCTGCTGGG CATCGCCCAA AGCCTGCACC CGACGCCTGC GGTGGGCGGC CTGCCGCGTA ATGAGGCGCT GGACTACATC CGCAGCCATG AACAACTCGA CAGAGGCTGG TACGCCGGAC CGATCGGCTG GCTTGACGAT CAGGGCAACG GCGAGCTCGC TGTCGCCCTG CGCTCGGCAT TGCTCAATGG CCATAGGGCC ACGCTGTTCG CCGGCTGCGG GCTGGTCAGC GGGTCGGAGC CGGAAAGCGA ATACCGGGAA AGCGACCTGA AGATGCAGAC GATGAGGGAA GCATTGTCGG GAAGCGGCCT GTCTGGTTAG
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Protein sequence | MNPLPSFSDL QGCLTGGLME CLHSARAQVS TARPRVLASF STPSPHVEPF GLFTANREQV QPACLWHVQA QGQYRLGLGL AHEFNAGPAD SWQTLENRWR DMAATAVVRG DHRPTLFGGF AFDRRQPRTR LWRDFPDAAL TLPRFEFHES DGQTRLIVNV LIDEHSQCAA LAEALAGEWA EILARPLPGA PASGDQFVRL SMAHLWKQDV FHAVNRIKRG GLEKVVLARS QNVAAASPLE QVMQRLMHKQ PNAYLFAFAR GSSCFMGASP ECLLTVRGDQ LHTMALAGTA PRGANCADDA RLGEQLLLSE KDNSEHAMVI DCIRHGLAEH CLVLDIACRP RLHKLPHIQH LLTPVKGTLA PNASLLGIAQ SLHPTPAVGG LPRNEALDYI RSHEQLDRGW YAGPIGWLDD QGNGELAVAL RSALLNGHRA TLFAGCGLVS GSEPESEYRE SDLKMQTMRE ALSGSGLSG
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