| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2593 |
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| Symbol | |
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| ID | 1184245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2866609 |
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| End bp | 2867769 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637393963 |
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| Product | multidrug resistance protein, AcrA/AcrE family |
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| Protein accession | NP_792402 |
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| Protein GI | 28869783 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.800698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATT TGAGCGATTG GCGTGTGATG CCTGCGATAG CGCTGCTGGC AGCGTTGGGT
CTTGCCGGTT GTGAACAGAA GCCGCAGCAG GATCACGCCG CCTCGGCAGC GCCCAAAGAG
GTTGAAGCGG TTGCGGTCAA AGCCGAATCG TTCACGGTGG TCGACGAACT GCCCGGCCGT
ATCGAGCCGG TTCGTGTGGC ACAGGTGCGT GCACGGGTGG CTGGCATTGT GCTCACTCGC
AATTTCGAGG AAGGCGCCGA CGTGAGAGCC GGCGCAGTGC TGTTCCAGAT CGACCCGGCG
CCCTTCAAGG CGGCATTGTC CAAGGCGCAG GGTGATCTGG CGCGCACCGA AGCCACGTTG
TTCGAAACCC AGGCCACGGT CAAACGTTAC GAGTCGCTGG TGGAGATCGA AGCGGTCAGC
CGCCAGACCT TCGACACCGC CCGCTCCGCA CTGCAAAACG CCGCCGCCGC CAAAAAATCG
GCCCAGGCTG ATGTGGAAAC GGCCAGGCTG GACCTGGGCT ACGCTACGGT CAGAGCGCCT
ATTTCAGGGC GCATCGGGCG CGCGATGGTC ACCGAAGGCG CGCTGGTCGG TCAGGGCGAA
ACCACGCTGC TGGCGACCAT TCAGCAACTC GACCCGGTCT ACGCCGACTT CACCCAACCG
GTCGCCGACG CCTTGCAGAT GCGCGCCGCC ATTCAGGAAG GCCGCTTGCC CAAGGGCGGC
GAGGACGCCT TGTCACTGAG CGTCGACGGC ACCGACTATC AGAGCAGCGG CACCCTGCTG
TTTACCGACG TGGCAGTAGA CCGGACCACC GGCCAGGTGT CATTGCGTGC CCGCTTCGCC
AACCCCAAAG GCGTGTTGCT GCCGGGCATG TATGTGCGGG TGCGCACGCC GCAGCGGGTC
GATGCCAACG CCATTCTTGT CCCTCAGCGT GCCGTGCAGC GCTCCAGTGA TGGTGCGGCC
CGCGTGCTGA TGATCGCTCA GGACGGCACG GCAGAAGCGC GTCCGGTCAA AACCGGCGCC
ATGCAGGACT CGCGCTGGCA GATCACCGAA GGCCTGAAAG AGGGCGAACA GGTCATCATC
GGCAACATGA CTGGGCTCAA CCCCGGTGAC AAGGTCGTGC CCAAATCGCC GTCCGCCCAG
CAGCAGGCCA AGGCTCAATA A
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| Protein sequence | MSNLSDWRVM PAIALLAALG LAGCEQKPQQ DHAASAAPKE VEAVAVKAES FTVVDELPGR
IEPVRVAQVR ARVAGIVLTR NFEEGADVRA GAVLFQIDPA PFKAALSKAQ GDLARTEATL
FETQATVKRY ESLVEIEAVS RQTFDTARSA LQNAAAAKKS AQADVETARL DLGYATVRAP
ISGRIGRAMV TEGALVGQGE TTLLATIQQL DPVYADFTQP VADALQMRAA IQEGRLPKGG
EDALSLSVDG TDYQSSGTLL FTDVAVDRTT GQVSLRARFA NPKGVLLPGM YVRVRTPQRV
DANAILVPQR AVQRSSDGAA RVLMIAQDGT AEARPVKTGA MQDSRWQITE GLKEGEQVII
GNMTGLNPGD KVVPKSPSAQ QQAKAQ
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