Gene PSPTO_2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2584 
Symbol 
ID1184236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp2854015 
End bp2854698 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content61% 
IMG OID637393954 
Producthypothetical protein 
Protein accessionNP_792393 
Protein GI28869774 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0070] Glutamate synthase domain 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0278158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG TCGATCTTTC CAGCGCCAGC GTGCGCGACC TCAATCAGGC CCTGCACGAT 
CAGGTCAAGG ACCTGCAGGA CCGTGAATGG CTGGTCACAC ATCCCGACGG CGCCCATAAC 
CTGGCGGTCG GCGTCAACGA AGCCATCTCC ATCGATATTC AGGGCCATGC CGGCTATTAC 
TGCGCGGGCA TGAACCAGAA AGCCTCGATC ACCGTGCACG GCAACGTCGG CGTCGGTTGT 
GCGGAAAACA TGATGTCCGG CGCCGTGCGG GTCAAGGGCA GCGCCTCACA GGCTGCAGGT 
GCCACGGCGC ATGGCGGTTT GCTGGTGATC GAAGGCGATG CCGGTGCCCG TTGCGGGATT 
TCCATGAAGG GGATCGACAT CGTGGTCGGC GGCAGCATCG GCCACATGAG CTGCTTCATG 
GGCCAGGCCG GTCGATTGGT GGTGTGCGGC GATGCAGGCG ATGCGCTGGG CGATTCGCTG 
TACGAAACGC GGATCTACGT CAAAGGCAAG GTTGAATCGC TGGGCTCCGA CTGTATCGCC 
AAGGAGATGC GCGACGAGCA CCTGCAAGAG TTGCAGGAAC TGCTCAATCG CGCAGGCTTC 
AACGAGAAGG CCGAGGATTT CAAGCGCTAC GGCTCGGCTC GCCAGCTGTA CAACTTCAAA 
GTCGATAACG CCTCCGCGTA CTGA
 
Protein sequence
MKTVDLSSAS VRDLNQALHD QVKDLQDREW LVTHPDGAHN LAVGVNEAIS IDIQGHAGYY 
CAGMNQKASI TVHGNVGVGC AENMMSGAVR VKGSASQAAG ATAHGGLLVI EGDAGARCGI 
SMKGIDIVVG GSIGHMSCFM GQAGRLVVCG DAGDALGDSL YETRIYVKGK VESLGSDCIA 
KEMRDEHLQE LQELLNRAGF NEKAEDFKRY GSARQLYNFK VDNASAY