| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2572 |
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| Symbol | |
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| ID | 1184224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2841181 |
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| End bp | 2842194 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393943 |
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| Product | peptide ABC transporter, ATP-binding protein |
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| Protein accession | NP_792382 |
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| Protein GI | 28869763 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.488371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAATC AAGCCCTGAA CGCCAGCATC AAAAAAGACA TTGCTCTGGA ACTGTGCGAC
ATCCGTCGTG AATTCAGCAT CAGCCGTGGC TTTTTCAAAC CCAACGCCAC CTTGAAAGCA
GTCGATGGTG TATCGCTGCG TCTGATGCGC GGCGAAACCC TCGGGCTGGT CGGCGAATCC
GGTTGCGGCA AAAGCACGCT AGCGAAGATG CTGCTGGGCC TGCTCGCGCC CAGCAGCGGC
GATGTGCTGG TCAATGGCAA GCATCTAGCC GGCACCGACC GCAAGGAAAT GGCGCGGCGC
ATCCAGCCGA TCTTTCAGGA CCCTTACTCA TCCCTGAACC CGCGCAAAAC CCTGCGCGAA
ATCGTCACCC TGCCGCTGAT CGTGCATGAC ATCGGCAGCA ACGCCGAACG CCGCCAGCGC
GTTGAGGCGA TGATGGACGT GGTCGGCTTG CCGAAACGCG TCATAGACAG CTATCCCAGC
CAGCTTTCCG GTGGCCAGCG CCAGCGCGTG GCGATTGCCC GGGCGCTGGT GATGCGCCCC
GACGTGTTGA TCTGCGACGA ACCAACTTCG GCGCTGGACG TGTCGGTGCA GGCGCAGATT
CTCAACCTGT TGCAAGACCT GAAAAAGGAA TTCGGCCTGA CCTACCTGTT GATCAGCCAC
AACCTGGCGG TCATCGAGCA TCTGGCCGAC CGGGTGGCGG TGATGTACCT GGGCCGCATC
GTCGAGGAAC GCAGCCGGGA ATCGCTTTTC GCCCGACCAG GGCATCCCTA CACCCAGGCG
CTGCTGGACT CGGTACTGAC CCCCGACCCG CACCTGGGCA TTCCCGATCT GGGCCTGCAC
GGCACCTTCC CCAACCCCAT GTCGCCGCCG TCCGGCTGCG CGTTTCATCC GCGCTGCCCG
AGTTGCATGG CGGTGTGCAA GGAAAACTAC CCGATCGCTG GCCGCATGGA AGGCGGAACC
GTCCGCTGCC ACTTGCGCGA CACCTCGAAA ACCCTGGAGC TGATGCCCTC ATGA
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| Protein sequence | MTNQALNASI KKDIALELCD IRREFSISRG FFKPNATLKA VDGVSLRLMR GETLGLVGES
GCGKSTLAKM LLGLLAPSSG DVLVNGKHLA GTDRKEMARR IQPIFQDPYS SLNPRKTLRE
IVTLPLIVHD IGSNAERRQR VEAMMDVVGL PKRVIDSYPS QLSGGQRQRV AIARALVMRP
DVLICDEPTS ALDVSVQAQI LNLLQDLKKE FGLTYLLISH NLAVIEHLAD RVAVMYLGRI
VEERSRESLF ARPGHPYTQA LLDSVLTPDP HLGIPDLGLH GTFPNPMSPP SGCAFHPRCP
SCMAVCKENY PIAGRMEGGT VRCHLRDTSK TLELMPS
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