| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2569 |
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| Symbol | |
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| ID | 1184221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2836915 |
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| End bp | 2838438 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637393940 |
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| Product | amidase family protein |
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| Protein accession | NP_792379 |
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| Protein GI | 28869760 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.111289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACC GATCCGAGCT CCTTGGCAAA TCCGCCACCG AACTGCGTGC ACTGATCGGC
AACAAGCAGA TCTCGCCAGT GGAATTGCTC GACGCCTGCA TCGAGCGCAT TGAATCCCTC
AATCCGAAAA TCAATGCGTT CGCCGCCACC TGCTTTGAGC GCGCCCACGA CGAGGCACTG
CTGGCCGAGC ATGCCGTTCT GCAAGGCAAA CCGCTGGGGC TGCTGCACGG CCTGCCCATA
GGCATCAAGG ACCTGGAAGA AACCGCTGGC GTGCTCACCA CCTACGGCTC ACAACTGTTT
CGCGACAACA TTCCCGCTCA GGACAACCTG TTCGTGGCCC GTCTGCGCGC GGCCGGGGCC
ATTATGGTCG GCAAGACCAA TGTCCCGGAA CTCGGCGCCG GAGCCAACAC CCGCAACGTG
GTGTGGGGCG CAACCGGCAA CCCGTTCAAT CCCGAACTGA ATGCCGGCGG CTCCTCAGGT
GGCTCGGCCG CCGCGCTGGC GGTAGACATG GTGCCGCTGT GCAGCGGTTC GGACACCGGA
GGCTCGCTGC GCATTCCCGC AGCACTTTGC GGCGTCGTCG GCCTGCGCCC TTCGCCGGGC
CTGGTGCCGA GCGAGCGCAA GAAACTCGGC TGGACGCCCA TCTCCGTCGT CGGCCCGATG
GGCCGCAACG TCGCCGACAC CCTGCTGCAA CTGCGCGCCA GCGCCGGGCT GGCGCAGTCC
GACCCATTGA GCTATGCCAT CGCCGATGAC GAATTCGCGC CGCGCACTGT AGACCTCAGC
CAGCTGCGAG TCGGCTACAG TGAAGATTTC GGCACGTGCG CAGTGGACAC TCATATTCGT
GCGGTCTTCC GGGAAAAAAT CAGCGCACTC AAACCGCTGT TCAAGTCCTG CGACGCCATC
GACCTGAACC TGACCAGCGC CCACCGCACC TTCGACGTAC TGCGCGCCGA AGCCTTCGTC
GCCGGCCTAC AGGACGCCCA CGACCGCGAC CCGGACGCGC TGGGCCCCAA CACCCGCGCC
AACTTCGAAA TGGGCGCGGC GATGTCACTG CAAGATTGCG TCAAAGCGCA TGGCGAGCAG
AGCCGACTGT TTCGAGGCTT CCAGAAACAA TTCGAACACT ACGACCTGAT CCTCGCGCCA
ACCACACCCG TGTCGCCCTT CCCCTGGAGC GAACTGTACC TGCGCGAAGT CAACGGCGTG
CAATTGGACA ACTACTACCG CTGGTTGGCG TTGTGCTACA CCGTCACCCT GACCACCAAC
CCCGCCTTGT CACTGCCCTG CGGCACAGAT CACCAAGGCA TGCCATTCGG GCTACAAGTG
ATCGGCGGCT TTCGTGGCGA CGCAAAACTG CTGGCCTGCG CCGAGGCGCT TGAACAAGCA
ACGGCGAACG ATCCCCGCTT GTCCCGGCCA CGCCCTGATC TGCAAAAACT GCTGGCGTCG
GCGGTCGATC TGACGCATAT CGTCACCCAT CCACCGGTTT ACGGAGGATC GAAGGGCGGG
AAACCGGAGG TGGGGGCGAT GTGA
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| Protein sequence | MQNRSELLGK SATELRALIG NKQISPVELL DACIERIESL NPKINAFAAT CFERAHDEAL
LAEHAVLQGK PLGLLHGLPI GIKDLEETAG VLTTYGSQLF RDNIPAQDNL FVARLRAAGA
IMVGKTNVPE LGAGANTRNV VWGATGNPFN PELNAGGSSG GSAAALAVDM VPLCSGSDTG
GSLRIPAALC GVVGLRPSPG LVPSERKKLG WTPISVVGPM GRNVADTLLQ LRASAGLAQS
DPLSYAIADD EFAPRTVDLS QLRVGYSEDF GTCAVDTHIR AVFREKISAL KPLFKSCDAI
DLNLTSAHRT FDVLRAEAFV AGLQDAHDRD PDALGPNTRA NFEMGAAMSL QDCVKAHGEQ
SRLFRGFQKQ FEHYDLILAP TTPVSPFPWS ELYLREVNGV QLDNYYRWLA LCYTVTLTTN
PALSLPCGTD HQGMPFGLQV IGGFRGDAKL LACAEALEQA TANDPRLSRP RPDLQKLLAS
AVDLTHIVTH PPVYGGSKGG KPEVGAM
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