| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2558 |
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| Symbol | phnF |
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| ID | 1184210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2826562 |
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| End bp | 2827281 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637393929 |
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| Product | transcriptional regulator PhnF |
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| Protein accession | NP_792368 |
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| Protein GI | 28869749 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.153571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGTTGT CTAGACAAGA CGAGCCGTTA TACCTCGGGC TGGCCGAAAC CCTACGCGAC
GAGCTGGCCG GCTACCAGCC CGGCGACTAC CTGCCTGCCG AGTTTCAGCT GGCCGAGCGC
TTCAGCGTCA ATCGCCACAC CATTCGCCGC GCGGTCGATG AACTGGTGCG TGAAGGCAGC
GTATTGCGCC GTCAGGGCAA GGGTACTCAG GTGCTGGAGC GTCCGCTGAT CTACCCGATG
CAGGCCGACA GTGCCTACAG CCAGTCGTTG TCGGCGCAGG GCGTTGGCGT GGAAGCCATT
CTGCTGCTGC GTCGCGAGTG CCAGGCCAGC CATGAAGACG CGCTGCATCT GGGCCTGGCC
GAGCACGCGC CAGTGATCGA GCTGCAGACC TTGCGCAAAT TGGACGGTCA GGCGGTAAGC
CTGATTTTCC ACCGTTACAG CGCCGTTTAC CACGAGTTGC TGGCTGATTA TCAGGGCGGC
TCGGTGCGTC AGTACCTGGC TGAGTGCGGG CTACCGTTGA GTCGCGCGCA AAGTCTGATC
GGCGCGCGAT TGCCGTCACG CGAAGAAGCC GGGTTGCTGT TGATGCCCCG GCACATGCCT
GCACTGACGG TGCTGACCGT TTCCTGCGAC GGAGCGGGGC AGCCGGTCGA GCTTTCCCGC
TCGGTCAGCC GCTCCGACCG CTTCCAGTAC CAGGTGGCGA CTGCCATTCC AACCAGATGA
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| Protein sequence | MQLSRQDEPL YLGLAETLRD ELAGYQPGDY LPAEFQLAER FSVNRHTIRR AVDELVREGS
VLRRQGKGTQ VLERPLIYPM QADSAYSQSL SAQGVGVEAI LLLRRECQAS HEDALHLGLA
EHAPVIELQT LRKLDGQAVS LIFHRYSAVY HELLADYQGG SVRQYLAECG LPLSRAQSLI
GARLPSREEA GLLLMPRHMP ALTVLTVSCD GAGQPVELSR SVSRSDRFQY QVATAIPTR
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