| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2556 |
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| Symbol | phnD |
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| ID | 1184208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2824697 |
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| End bp | 2825707 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637393927 |
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| Product | phosphonates ABC transporter, periplasmic phosphonates-binding protein |
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| Protein accession | NP_792366 |
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| Protein GI | 28869747 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.275314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAACC GTATCGGTCG CGTCCTCGCG TCTGCCGCTT TGCTGACCGC CTGTGCATTG
GGCACGGTCC AGGCAGCGGA AGAAAAAGTC ATCAATTTCG GCATCATGTC CACCGAATCG
TCGCAGAACC TGAAAAGTAT CTGGCAGCCG TTTCTCGATG ACATGAGCAA GAAAACCGGC
CTCAAGGTCA ATGCCAGCTT CGCGTCGGAC TATGCCGGGC TGATTCAGGG CATGCGCTTC
AACAAGGTCG ATGTGGCGTG GCTGGGCAAC AAGGCTGCGC TGGAAGCGGT GGACCGTTCC
AACGGCGAGA TTTTCGCTCA GACCGCCGCT GCCGATGGTT CCGCCGGTTA CTGGAGCCTG
CTGATCGTGC GCAAGGACAG CCCGATCAAC TCCGTCGAAG ACATGCTCAA GAACGCCAAG
AGCCTGACCT TCGGCAACGG TGACCCGAAC TCTACCTCGG GCTATCTGGT GCCCGGTTAT
TACGTGTTCG CCAAAAACCA TGTGGACGCC TCCACGGCGT TCAAGCGCAC CTTGAATTCC
AGCCACGAAG TCAACGCATT GAGCGTTGCC AAGGGCCAGC TCGATGTCGC GACGTTCAAC
ACCGAAAGCT GGGACCGCCT GGCCGTGACG CAGCCGGACA AGGTCGAACA ATTGAAAGTG
ATCTGGAAGT CGCCGCTGAT TCCAGCCGAC CCGATTGTCT GGAGCAAGGC GCTGTCGGAC
GAAAACAAGA CGAAGATTCG TGAGTTCTTC GCCAGCTATG GCGATACCGA CGAAGAGAAA
ACCGTCCTCA AGAACATGCA GATGGGCAAA TTCCTCAAGT CCAGTGATGA CCAGTTGTTG
CCGATTCGTC AACTTGAACT GTTCAAGCAG CGCACTGAAG TCGTCGCCAG CACCACGCTG
AACGCAGAGG AGAAGGCCAG CCGTCTCAAG GACATCGATG CCAGCCTGAG CAAATTGCAG
GAACGCATTA CCGAGCTTAA CCAGAAAACC GCGACCAGTA CCGCGGGTTG A
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| Protein sequence | MFNRIGRVLA SAALLTACAL GTVQAAEEKV INFGIMSTES SQNLKSIWQP FLDDMSKKTG
LKVNASFASD YAGLIQGMRF NKVDVAWLGN KAALEAVDRS NGEIFAQTAA ADGSAGYWSL
LIVRKDSPIN SVEDMLKNAK SLTFGNGDPN STSGYLVPGY YVFAKNHVDA STAFKRTLNS
SHEVNALSVA KGQLDVATFN TESWDRLAVT QPDKVEQLKV IWKSPLIPAD PIVWSKALSD
ENKTKIREFF ASYGDTDEEK TVLKNMQMGK FLKSSDDQLL PIRQLELFKQ RTEVVASTTL
NAEEKASRLK DIDASLSKLQ ERITELNQKT ATSTAG
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