Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2533 |
Symbol | |
ID | 1184185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2796179 |
End bp | 2796754 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637393906 |
Product | acetyltransferase, GNAT family |
Protein accession | NP_792345 |
Protein GI | 28869726 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.177465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCAGA TTCGCCCCAT GACCCCGGAA GACTTCGACC GCTTCTGGCC TACCTTCCAG GCTGTCGTTG TCGCTCAGGA AACCTACGCT TACGACCCTG CGCTCACTCA AGAGCAGGCG TGTGACGTGT GGCTGAAGCT GCCTTTGCAC ACGCTGATCG CTGAGGAGGA CGGTCAGTTG CTGGGCAGTT ACTACCTCAA GGCCAATGCG GCAGGCCCGG GCAATCATGT CTGCAACTGT GGCTATATGG TGACGGACGC AGCCCTGGGC CGTGGTGTGG CGCGGTTGAT GTGTGAGCAC TCACAGCAAC TGGCTCGCGA CAGCGGCTTT CTGGCGATGC AGTTCAACTC GGTGGTCGCC AGCAATGAAG TGGCGGTTGC GCTGTGGGCC AAGCTGGGTT TCGAGACGGT TGGGCGCTTG CCCAAGGCTT ATCGTCATGC CCGATTGGGG CTGGTGGATT GTCTGGTGAT GTTCAAGTGG CTGGCCGACG CGCCAATAGC GGCCGAGCCT GTGCAACCCA AATTGATTGG TCGCAAGAAT ATCGAGTCAG TGGTGTCGCG TCCGCGTCGC AAATAA
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Protein sequence | MIQIRPMTPE DFDRFWPTFQ AVVVAQETYA YDPALTQEQA CDVWLKLPLH TLIAEEDGQL LGSYYLKANA AGPGNHVCNC GYMVTDAALG RGVARLMCEH SQQLARDSGF LAMQFNSVVA SNEVAVALWA KLGFETVGRL PKAYRHARLG LVDCLVMFKW LADAPIAAEP VQPKLIGRKN IESVVSRPRR K
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