Gene PSPTO_2528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2528 
Symbol 
ID1184180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp2792008 
End bp2792637 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content64% 
IMG OID637393901 
Producthypothetical protein 
Protein accessionNP_792340 
Protein GI28869721 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.409014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCCTGG TGGCGAGCCT GTCGGTGCTG GCAGGCATGA CCGATGCCAT CGGCTTCATG 
GCCACCGGCG ATTTCGTCTC GTTCATGAGC GGCAACACCA CGCGCCTTGC GGTGGCGATC 
AGTGATGGCG ATTTGAGCGT CACACTCCGT CTGGCCCTGG CCATCTTTGC GTTTATTGCC 
GGCAATGCAC TGGGCGTTGT CGTTGCGCGC CTGGGCAACC GGCGCGCCCT GCCCTTACTG 
CTGGCTATCG CCACGCTGTT GTGTGCCGCT GCGGCGTGGC CGTTGGCGAA CAATATGCTT 
GCCCTGATCT GGGCGATTCT GGCGATGGGC ATGCTCAACG CCGCTGTCGA GCAGGTCAAC 
GGGCTGCCGG TGGGCCTGAC CTACGTGACC GGCGCGCTGT CGCGACTGGG GCGCGGTCTG 
GGCCGCTGGA TGCTCGGCGA ACGCCGGGAT GGCTGGCGCA TTCAACTGGT CCCGTGGGCC 
GGGATGTTCA TTGGCGCAGT GATCGGCGCG TTGCTTGAAC ATCGTCTGGG GCTCAATGCC 
TTGCTGGTCA GCGCCAGCCT GTCAGCGTTA ATGGCGCTGG TGTCGCTGAA AATCCCGCAT 
CGCTGGCAAC GTCAGTACAT GCCGCGCTGA
 
Protein sequence
MCLVASLSVL AGMTDAIGFM ATGDFVSFMS GNTTRLAVAI SDGDLSVTLR LALAIFAFIA 
GNALGVVVAR LGNRRALPLL LAIATLLCAA AAWPLANNML ALIWAILAMG MLNAAVEQVN 
GLPVGLTYVT GALSRLGRGL GRWMLGERRD GWRIQLVPWA GMFIGAVIGA LLEHRLGLNA 
LLVSASLSAL MALVSLKIPH RWQRQYMPR