Gene PSPTO_2524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2524 
Symbol 
ID1184176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2786979 
End bp2788007 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content62% 
IMG OID637393897 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_792336 
Protein GI28869717 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.340978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTC TGCAGCTCGA AGGTCTCTCC AAACGCTATG GCTCTATAGA CGCTGTGGTT 
GCCACCCACC TGAGTGTGGA CAAGGGCGAA TTCGTTTCAC TGCTCGGCCC TTCCGGCTGT
GGCAAAACCA CCACGTTGCA AATGATCGCA GGCTTCGTTG AGGTCAGTGA CGGGCGCATC
GTGCTCGACG GCCGTGACAT CACTCATGCC AAACCGAGCA GCCGAGGGCT TGGCGTGGTG
TTTCAGAGTT ATGCGCTGTT CCCGCACATG ACCGTGGCCG ACAACGTGGC GTTCGGCCTG
CGTATGCGCA AGGTCGCCAA AGCAGAATTG CAACAACGGG TCAGCAAGGT ACTCGCGCTG
GTGCGTCTTG ATCAGCACGC CGAGCGCTAC CCCCGCGAGC TGTCAGGCGG ACAACGGCAG
CGGGTCGCGC TGGCCCGGGC GTTGGTGATC GAGCCGCCGG TGTTGCTGCT GGATGAGCCA
CTGTCGAACC TGGATGCCAA CCTGCGCGAA GAAATGCAGT TCGAGATTCG CCGTATTCAG
AACGAAGTGG GCATTACCAC GCTGATGGTC ACCCACGATC AGGCCGAAGC CCTGTCGATC
AGCGACCGGG TGGTAGTCAT GCAGGCCGGG CGCATCACTC AGATCGACGC GCCTTACACG
CTTTACGAGC ACCCGCGCAC GCGCTTTATC TCGGGCTTTG TCGGCAAGGC CAACATGGTG
CAAGGCGATC TGGACAGCAG CGGCACCCCG CAGATTCGCC AGTTGCCCGG TGACGGCGCG
CTGACCCTGA GCCTGCGCCC GGAGAAAATC GACCTGGTCG CACCCGGTTG CGGGCGTCTG
TCAGGCCGTA TCACCACGCG CTACTTCCTC GGCAGCCAAT GGCTGTATCG CATTCAGACC
GGCATCGGTG AACTGACCGT GGTGCGTCGC AACGACGGGC AAGCCCCGCT GGAGCAAGGC
GCAGCAGTCG GCATGGACTG GCCGGCCGAG TTGCTGCGTG TACTGGATGC CGACGAGGTG
CGTGCATGA
 
Protein sequence
MAFLQLEGLS KRYGSIDAVV ATHLSVDKGE FVSLLGPSGC GKTTTLQMIA GFVEVSDGRI 
VLDGRDITHA KPSSRGLGVV FQSYALFPHM TVADNVAFGL RMRKVAKAEL QQRVSKVLAL
VRLDQHAERY PRELSGGQRQ RVALARALVI EPPVLLLDEP LSNLDANLRE EMQFEIRRIQ
NEVGITTLMV THDQAEALSI SDRVVVMQAG RITQIDAPYT LYEHPRTRFI SGFVGKANMV
QGDLDSSGTP QIRQLPGDGA LTLSLRPEKI DLVAPGCGRL SGRITTRYFL GSQWLYRIQT
GIGELTVVRR NDGQAPLEQG AAVGMDWPAE LLRVLDADEV RA