| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2517 |
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| Symbol | |
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| ID | 1184169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2779927 |
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| End bp | 2781276 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393890 |
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| Product | sodium/hydrogen exchanger family protein |
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| Protein accession | NP_792329 |
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| Protein GI | 28869710 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.224345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTA TTGTCTGCAT GAGCGTGCTG GGCGTGCTGT TGATGCTGCT GGCGCTCACC
TCGTCCTATC TGCGCTGGAT GCCGGTCACC ACCTCGGCGG TGTGCCTGGC CTTCGGCTTC
GGTATCGGCC CGCTGGGGCT GGATATCATC AACCTGGACT TCAAGCAATC CCGCGAGTGG
CTGGAATGCC TGACCGAAGT CGCGGTGCTG TTTTCGCTGT TCGGGACCGG CATCAAGTTG
CGCCTGCCGC TGAACTGCAA AGCCTGGCAT TCGGCGTACT GGCTGGCCGG CCCGGTGATG
CTGGCGACCA TTGCCGGCGT CAGCGTTGCG GCACATTACA TTTTCGCTAT TGATTGGGGC
GTGGCGCTGC TGCTCGGCGC GATGCTGTCG CCGACCGACC CGGTGCTGGC CGGGATGGTG
CAGGTCAACA GCGCGCAGGA TCAGGACCGC TTGCGCTTTG GCTTGTCCGG CGAAGCGGGT
CTCAACGATG GCACAGCATT TCCGTTCGTG ATCTTTGCCA TGCTTTACCT GAGTTCAGGC
GGCGTGACGG GCGACTGGGC GCAGCACTGG TTGCTCAAGG ACCTGATCTG GGCGGTTCCG
GCCGGGTTGC TGATTGGTTT TGGCATGGGT CGCGGCGTCG GGCACCTGAT GATTTTCCTG
CGCATCAAAA ATGCCGACAG CACCACCTCG CCCAATGACT TTCTGGCACT GGCGCTCATC
GCACTGGCCT ATGTGGTTGC CGAGGGCTTC GGTGCCTTTG GCTTTCTCTC GGTGTTTGCC
GCAGGCTTCG GCTTGCGCCA GGCCGAAATG CGCGTCACCC GCTCCGAGTT GCCTTCGGAG
CACGTCGCCC AGCCTGTGCT CGGCCACATG ACCGCCGCGT TGGACCAAGG CACCGTTGCC
AAGGCCGATG ACCTGAGCGA TTCGCAACTG GCCGCCGGGG TGATGATGGG CGATATGCTG
GCGTTCGGCA GCCTGGTGGA GCGCGCAATG GAAGTGTTGC TGATTACCTT GCTGGGCGCG
GCCTTGGCAT CTTACTGGGA CTGGCGCGCC ATCGGCCTTG GGCTGGCGCT GTTCTGCGTT
ATTCGCCCGG CAAGTGTGTG GCTGCTGGTC AGTCAAAAGT TGCTCAATGC CAGACAAAAG
GCGTTGGTGG GCTGGTTCGG CATTCGCGGC ATCGGCAGCC TGTATTACCT GTGCTTTGCC
CTGTCACATG GCCTGGCCGA CGATGTCGGC AACGTCGTGA TCGGCATGAC GCTGTCGGTG
GTGGCGCTGA GTATTCTGCT GCACGGCATC AGTATTCAGC CGCTGCTGGA GCGTTACGAG
CGCAGCACAG CGGCCAATCC GGACAAATGA
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| Protein sequence | MSFIVCMSVL GVLLMLLALT SSYLRWMPVT TSAVCLAFGF GIGPLGLDII NLDFKQSREW
LECLTEVAVL FSLFGTGIKL RLPLNCKAWH SAYWLAGPVM LATIAGVSVA AHYIFAIDWG
VALLLGAMLS PTDPVLAGMV QVNSAQDQDR LRFGLSGEAG LNDGTAFPFV IFAMLYLSSG
GVTGDWAQHW LLKDLIWAVP AGLLIGFGMG RGVGHLMIFL RIKNADSTTS PNDFLALALI
ALAYVVAEGF GAFGFLSVFA AGFGLRQAEM RVTRSELPSE HVAQPVLGHM TAALDQGTVA
KADDLSDSQL AAGVMMGDML AFGSLVERAM EVLLITLLGA ALASYWDWRA IGLGLALFCV
IRPASVWLLV SQKLLNARQK ALVGWFGIRG IGSLYYLCFA LSHGLADDVG NVVIGMTLSV
VALSILLHGI SIQPLLERYE RSTAANPDK
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