Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2514 |
Symbol | |
ID | 1184166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2777569 |
End bp | 2778087 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637393887 |
Product | hypothetical protein |
Protein accession | NP_792326 |
Protein GI | 28869707 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0148269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGCGC CACGATGGTT ATGGTTGGTG ATACTGCTCA GCGGCAGCGC TGCGGCGGAC TGGCGTGAGG TGTTGCCCAA TGCCCAGGTT GTCGGTGGCG GCGAGCTGAC CCTGTTCGGC TTTCGTGTGT ACACCGCCAG GCTGCTCAGC CCGGCCAAAC CTTTCGTGGC AGATGCCCCG ATGGCGCTTG AACTGACCTA CCATCGCAAC ATCGACCGGG AAGATCTGGT CGATGCCAGT ATCGATGAAA TCAAGCGCAT CTCCGGGGCA CGCGTGACTA CCGAGCAACT GGCGGCATGG CGTGAGCAAA TGAATCAGTC ATTTGTCGAC GTTCAGCCGG GCATGAAGAT TACCGGTGTT TATCTGCCGG GCCGCGAAGC GCGGTTCTAT GTCGGCGACA AACTCCAGCA TGTGGTGCCC GACAGCCAGT TCGCCAAGGC GTTCTTTTCT ATCTGGCTTG ACCCCAAAAC CCGTAACCCC GAACTGCGCG AGCAGTTGCT CGGCAGTACC GGCTCATGA
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Protein sequence | MRAPRWLWLV ILLSGSAAAD WREVLPNAQV VGGGELTLFG FRVYTARLLS PAKPFVADAP MALELTYHRN IDREDLVDAS IDEIKRISGA RVTTEQLAAW REQMNQSFVD VQPGMKITGV YLPGREARFY VGDKLQHVVP DSQFAKAFFS IWLDPKTRNP ELREQLLGST GS
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