| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2510 |
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| Symbol | poxB |
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| ID | 1184162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2772382 |
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| End bp | 2774100 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393883 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | NP_792322 |
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| Protein GI | 28869703 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.172395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAAGA CCATCGCCGA CCATCTTGCG CAAACCCTCG CAGCGGCAGG TGTTTCCCAC
ATCTGGGGGG TGTCTGGTGA CAGCCTCAAC GGTTTGACCG ACAGCCTGGA GCGCATCGAC
TCGATCAACT GGATGCACAC CCGCCACGAA GAAGTTGCAG CCTTCGCTGC CGGTGCCCAA
GCGGCGTCCA GTGGCAAGCT GGCGGTCTGC GCAGGCAGCT GCGGGCCGGG CAATCTGCAC
CTGATCAACG GCCTGTACGA TTGCCATCGC AATCGCGTGC CGGTGCTGGC GATTGCAGCG
CATATTCCGT CTTCGGAAAT CGGCCTCGAT TACTTTCAGG AAACCCACCC GCAGGAGCTT
TTCAAGGAAT GCAGCCACTT TGTTGAACTG GTCAGCAACC CCGAACAGTT CCCTCGGGTG
CTGGAGCGTG CCATGCGTGC GGCGATCAGC CAGAAGGGCG TTGCCGTGAT CGTGCTACCC
GGTGATGTAG CGCTCAGCGA ATCACCTGAT GTACCCGCGA AATGGGTCGA GGCCACGCCG
CCTGTTGTCG TCCCGGCGGA CACCGACTTG CAGTCGATGG CCAACATGCT CAATGACTCA
AAGGCCGTAA CCTTGCTGTG CGGCGCAGGC TGCGCGGGCG CTCACGAGCA GATCCTCGCG
CTGGCTGACA CGCTGGGCGC ACCCATTGTT CATGCCTTGC GCGGCAAGCA GCACGTCGAA
TACGACAACC CGTTCGATGT CGGCATGACC GGCCTGATCG GTTTCAGCTC CGGTTACCAC
GCCATGCTGT CCTGCGACAC GCTGGTGATC CTCGGCAGCA GCTTTCCGTA CCGCAATTTC
TACCCCGAAA AAGCCAACAT CATCCAGATC GACCTCGACC CCACGCAGTT GGGCCGGCGC
ACGCCTGTGG CGCTCGGTCT GGTCGGTGGC GTGCGGGAAA CCCTCGACGC TCTCCAACCA
AAACTCAAGC CGCACACCGA CCGCCGTTTC CTCGACAAAG CCCTCAAGCA TTACGCCAAG
GCCCGTGAAG ACCTCGACGA ACTGGCTACG CCGACCCCCA ACGGCACGCC GATTCACCCG
CAATACCTCA CGCGCTTGGT CGATGAACAG GCCGACGCCG ACGCAATCTT CACCGTCGAT
GTCGGCACGC CAACCCTATG GGCCGCGCGC TACCTGCACA TGAACGGCAA GCGCAGCCTG
CTGGGCTCGT TCAACCACGG CTCGATGGCC AACGCCTTGC CTCAGGCGCT AGGCGCCAAG
GCCGAGCACC CGGACCGCCA AGTGGTCGCG TTGTGCGGCG ATGGCGGCCT GTCGATGCTG
CTGGGCGACC TGCTGAGCAT TCGCCAGTTG AATCTGCCGA TCAAAATGGT GGTGTTCAAC
AACAGCTCGC TGGGCTTCGT CGACATGGAA ATGAAAGCCA GCGGCTACGT GCCCCACGGC
ACCGACCTGC ATGAAACCAA CTTTGCCGGC ATCGCCTTGG GCGCAGGCAT TCTCGGCCTA
CGCGTGGAGA ACGCCGAAGA GTTGCCTGCT GCCTTGCGCA AGGCGTTCGA TCATCCCGGC
CCGGTGCTGA TCGATGTTGT TACCGCCAAG CAAGAGCTGG GCATCCCGCC GAAAATCAAA
CTGGCTCAAG CCAAAGGCTT CAGCTTGTAC ATGATGCGCG CGATCATGAG CGGGCGCGGC
AGTGAAGTGC TGGAGTTGGC GAAGACAAAC TTGCGTTAA
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| Protein sequence | MSKTIADHLA QTLAAAGVSH IWGVSGDSLN GLTDSLERID SINWMHTRHE EVAAFAAGAQ
AASSGKLAVC AGSCGPGNLH LINGLYDCHR NRVPVLAIAA HIPSSEIGLD YFQETHPQEL
FKECSHFVEL VSNPEQFPRV LERAMRAAIS QKGVAVIVLP GDVALSESPD VPAKWVEATP
PVVVPADTDL QSMANMLNDS KAVTLLCGAG CAGAHEQILA LADTLGAPIV HALRGKQHVE
YDNPFDVGMT GLIGFSSGYH AMLSCDTLVI LGSSFPYRNF YPEKANIIQI DLDPTQLGRR
TPVALGLVGG VRETLDALQP KLKPHTDRRF LDKALKHYAK AREDLDELAT PTPNGTPIHP
QYLTRLVDEQ ADADAIFTVD VGTPTLWAAR YLHMNGKRSL LGSFNHGSMA NALPQALGAK
AEHPDRQVVA LCGDGGLSML LGDLLSIRQL NLPIKMVVFN NSSLGFVDME MKASGYVPHG
TDLHETNFAG IALGAGILGL RVENAEELPA ALRKAFDHPG PVLIDVVTAK QELGIPPKIK
LAQAKGFSLY MMRAIMSGRG SEVLELAKTN LR
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