| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2500 |
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| Symbol | |
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| ID | 1184152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2764117 |
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| End bp | 2765568 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393873 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_792312 |
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| Protein GI | 28869693 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.589471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATCA CGCCTAAAAA CGGCACCGTC TTCGAGACCG ATTTGCCGGC CCGTCTGGAC
CGCTTGCCCT GGGGGCGCTT TCACACGCTG CTAGTGATTG CGCTAGGCAT CACCTGGTTG
CTCGATGGCC TGGAAGTGAC CCTCGCAGGT TCGGTAGCCG GCGCGCTCAA GGCCAGCCCG
GCGCTCAACC TCACCAACAG CGACATCGGC CTGGCGGGTG CTGCGTACAT CGCCGGGGCT
GTGCTCGGCG CACTGCTGTT TGGCTGGCTG GCGGACCGCC TCGGTCGGCG CAAGCTGTTC
TTCATCACCT TGCTGCTGTA CGTCGGTGCC ACCGCCGCCA CGGCATTTTC GTTCAGCGTC
TGGAGTTTCA TGCTGTTCCG GTTCTTGACC GGCATGGGCA TTGGTGGCGA GTACACGGCA
ATCAATTCGA CCATCCAGGA GTTCACCCCG GCCCGCTACC GTGGCTGGGT CGATCTGACC
ATCAACGGCA CATTCTGGCT GGGTGCTGCG CTGGGCGCGG TGGGTTCGAT TGTCTTGTTG
GACCCGCTGT GGGTGGGCGC GGAACTGGGC TGGCGTCTGT GTTTCGGGAT CGGCGCGGTG
TTGGGGCTGC TGGTGCTGCT GATGCGTCTG TGGCTGCCGG AAAGCCCGCG CTGGCTGTTG
ATTCACGGCC AGTCAGCGCA GGCGACGAAA ATCGTTGAGC AGATAGAGGC AGATTTACAG
CGCCGAGGCC ATGTGCTGCC TGCCGTCACG AGCAAGCCCT TACGTTTGCA TGTGCGCGAC
CACACGCCAC TGGGCGAGGT CGCCAGAACC CTGCTGGTGA CGTTTCGTCA GCGCTCGCTG
GTGGGCCTGA CGCTGCTGAC CGCACAGGCG TTCTTCTACA ACGCGATCTT TTTCACCTAT
GCGCTGGTAC TGACGGACTT CTATGACGTA CCTGCCGAGC GGGTTGGCTG GTACGTGCTG
CCACTGGCGC TGGGCAACTT CTGCGGTCCG CTGCTGCTGG GCAGGCTGTT TGACGTGGTC
GGGCGGCGGA CAATGATCAG CCTGACCTAC GGCCTGTCCG GTGTGCTGCT GGCAATCAGT
GGGTATCTGT TCCAGCAAGG GCTGCTGGAC GTTACCCAGC AGGCCATCGC GTGGATGGTG
ATTTTCTTCT TTGCCTCGGC AGCGGCCAGT TCGGCCTACC TGACCGTGGC CGAAACCTTC
CCGCTGGAAA TTCGCGCGTT GGCGATTGCG GTTTTCTATG CGTTTGGTAC CGGGCTGGGC
GGCATGATCG GCCCGACGCT GTTCGGGGAA CTGATCGACA CCGGAGAGCG CAGCAATGTG
TTTATCGGCT ATCTGATCGG GGCGGGGTTG ATGTTGCTGG CGGCGCTGGT GCAGTCGATC
TGGGGCGCGG CTGCCGAGCG CAAGTCACTC GAAGAGGTAG CACGGCCGTT ATCGCAGGCC
GGGGACGTGT AA
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| Protein sequence | MPITPKNGTV FETDLPARLD RLPWGRFHTL LVIALGITWL LDGLEVTLAG SVAGALKASP
ALNLTNSDIG LAGAAYIAGA VLGALLFGWL ADRLGRRKLF FITLLLYVGA TAATAFSFSV
WSFMLFRFLT GMGIGGEYTA INSTIQEFTP ARYRGWVDLT INGTFWLGAA LGAVGSIVLL
DPLWVGAELG WRLCFGIGAV LGLLVLLMRL WLPESPRWLL IHGQSAQATK IVEQIEADLQ
RRGHVLPAVT SKPLRLHVRD HTPLGEVART LLVTFRQRSL VGLTLLTAQA FFYNAIFFTY
ALVLTDFYDV PAERVGWYVL PLALGNFCGP LLLGRLFDVV GRRTMISLTY GLSGVLLAIS
GYLFQQGLLD VTQQAIAWMV IFFFASAAAS SAYLTVAETF PLEIRALAIA VFYAFGTGLG
GMIGPTLFGE LIDTGERSNV FIGYLIGAGL MLLAALVQSI WGAAAERKSL EEVARPLSQA
GDV
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