| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2493 |
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| Symbol | |
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| ID | 1184145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2756324 |
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| End bp | 2758150 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393866 |
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| Product | glycosyl hydrolase, family 15 |
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| Protein accession | NP_792305 |
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| Protein GI | 28869686 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATC GTCCGCAAGA AGCACAAAAC CGTATCGAAG ACCACGGCAT TATCGGCGAC
ATGCGCAGCG CTGCGTTGAT TGCCGACACC GGCAGTATCG ACTTCTGTTG CTGGCCGGAC
TTCGACAGCC CGTCGATCTT CACCGCGCTA CTGGACACCC CCGACGCGGG GATCTTTCAA
CTGGCGCCTG ACCTGCCGGA CGCCAGAAGG CTGCAGATCT ATCTGCCGGA CACCAATGTG
CTGCAAACCC GCTGGATTGC CGAGCAGGCA GTGGTGGAAG TCACTGATCT GATGCCGATC
GGCGAGGATC AAGACGACTT GCCACGCATC GTGCGCCGGG TTCAGGTGCG TTTTGGCGAG
GCCACGATAC GCATGCGTTG CCGCGTGCGC ATGGACTACA GCCGTGCCGA CACCACAGCG
CGCGTCGATG GTCAGGACAT CTGTTTCGAG GCCCAAGGGC AGCCGGGCAT GCGCTTGTCA
GCAGCTACGC CGTTGCACCT GGAACAGCAC GACGCCGTCG CCGAGTTTCA CATGCACAAA
GGCCAGACCA TCGAGTTCAT TCTGGGTGGC ATCGACGACC CGAATGTTGC TGCAGGCAAG
TGCTCGCGTT ATTTCGATGA CACCCTGAAG TTCTGGCGGC GCTGGGCCGG ACAGTCGCAG
TACAAGGGCC GCTGGCGCGA AATGGTCACC CGTTCGGCAC TGGCGCTCAA ATTGCTGACT
TCGCGCAAGC ATGGCGGCAT TGTTGCCGCT GCGACGTTCG GCCTGCCGGA AACCGAAGCT
GGCGAGCGTA ACTGGGATTA CCGTTACACG TGGATCCGTG ACGCCTCATT CACCGTGTAC
GCGTTCATGC GCCTGGGTTA CACCGATGAG GCCAATGCCT TCATGGGCTG GGTGCGCGGG
CGACTGGACG ACTGCTGCGA GCAGACCGAG AAGCTCGGCA TTCTGTATGC CCTTGACGGC
CACGCAGAAC TGCCCGAGGA GCACCTCGAT CACTTGACCG GTTACGGCGG TGCGCAGCCG
GTGCGGATCG GCAACGAGGC GTACAAGCAG GTTCAACTGG ATATCTACGG CGAATTGATG
GACGCCGTGT ACCTGGCCAA CAAGTACGGC GACGCGATCT CCCATGACGG CTGGCAGCAC
GTTGTGCGCC AGGTCGATTA TGTGTGCGAA CACTGGAACG ACCGCGACGT GGGTATCTGG
GAAATGCGCG GTGGCGACCA GCACTTTCTG CACTCGCGGC TGATGTGCTG GGTCGCGTTG
GACCGGGCAC TGCGCCTAGC CTTTAAACGC TCACTGTCAG GGCCATTCGA GCGCTGGAAC
AAGGTCCGTG AAGATATCCA GAACGACATC TGGGACAACT TCTGGAACGA AGAACTCGGT
CATTTTGTGC AGTACAAAGG CAGCCGCAAT CTGGACGCCT CGATGCTGCT GATGCCGCTG
GTGCGCTTCG TCGGTGCCAA TGACCCGAAA TGGCTGGCGA CACTGGACGC CATCGAAGCT
GCGCTGGTGC GTGACGGAAT GGTGTTCCGC TACCGCAATG ATGACGACCA TGATGATGGC
CTGGCAGGTG AGGAGGGCGC GTTTGTGGCC TGTTCGTTCT GGTATGTCGA ATGCCTGGCC
CGCGCCGGTC GGGTAGAGCA GGCGCACCTG GAGTTCGAGC AGTTGCTGCG TTACGCCAAC
CCGCTGGGTT TGTATGCCGA AGAGTTCGAC GGCCATGCCC GTCATCTGGG CAACACGCCG
CAGGCCCTGA GTCACTTGGC GCTGATCAGT GCGGCGAGTT TCCTGGACCG TAAACTGAGC
GGCGAACAGG CGCTTTGGCA ACCCTGA
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| Protein sequence | MADRPQEAQN RIEDHGIIGD MRSAALIADT GSIDFCCWPD FDSPSIFTAL LDTPDAGIFQ
LAPDLPDARR LQIYLPDTNV LQTRWIAEQA VVEVTDLMPI GEDQDDLPRI VRRVQVRFGE
ATIRMRCRVR MDYSRADTTA RVDGQDICFE AQGQPGMRLS AATPLHLEQH DAVAEFHMHK
GQTIEFILGG IDDPNVAAGK CSRYFDDTLK FWRRWAGQSQ YKGRWREMVT RSALALKLLT
SRKHGGIVAA ATFGLPETEA GERNWDYRYT WIRDASFTVY AFMRLGYTDE ANAFMGWVRG
RLDDCCEQTE KLGILYALDG HAELPEEHLD HLTGYGGAQP VRIGNEAYKQ VQLDIYGELM
DAVYLANKYG DAISHDGWQH VVRQVDYVCE HWNDRDVGIW EMRGGDQHFL HSRLMCWVAL
DRALRLAFKR SLSGPFERWN KVREDIQNDI WDNFWNEELG HFVQYKGSRN LDASMLLMPL
VRFVGANDPK WLATLDAIEA ALVRDGMVFR YRNDDDHDDG LAGEEGAFVA CSFWYVECLA
RAGRVEQAHL EFEQLLRYAN PLGLYAEEFD GHARHLGNTP QALSHLALIS AASFLDRKLS
GEQALWQP
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