Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2488 |
Symbol | |
ID | 1184140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2750281 |
End bp | 2751189 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637393861 |
Product | glutaminase, putative |
Protein accession | NP_792300 |
Protein GI | 28869681 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2066] Glutaminase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.347136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGACC TGCTGAACGA AATCCTCGAT GAAGTAAGAC CCTTGCTCGG TCAGGGCAAG GTGGCCGATT ACATTCCGGC GCTGGGCGGG GTGCGGCCTG ATCAGTTGGG CATCGCGGTG TATGGCAACG ACGGCCAGGT GTTCAGCGCC GGTGACGCCG AGACGCTGTT TTCGATTCAA AGCATTTCCA AGGTATTCAG CCTGGTGCAG GCCATCGGCC ATTCCGGCGA GGACATCTGG CAGCGCCTTG GCCACGAGCC ATCCGGCCAG CCGTTCAACT CGCTGGTGCA GCTGGAGTTC GAGCAGGGCA GGCCGCGCAA CCCGTTCATC AATGCCGGTG CACTGGTGAT CTGCGACATC AATCAGGCGC GTTTTGCCGC CCCGTCGTTG TCGATGCGCG ATTTCGTGCG TCGCCTGTGC GGCAACCGCT CGATCACTTC CGATTCCAAG GTGGCCGAAT CCGAATACCA GCACCGTTCG CGCAACGCGG CGGCGGCTTA TCTGATGAAA TCCTTCGACA ATTTCCACGG CGATGTAGAA GACGTGTTGC GCAGCTATTT TCACCATTGT GCGCTGAGCA TGAATTGCAT CGATCTGGCG AAAGCGTTCG GTTTTCTGGC CAATCAGGGT TTTTGCGCCC ACAGTGGCGT GCAGATCCTC ACCGCACGCC AGGCCACTCA GGTCAATTCG ATCATGGCCA CCAGCGGTCT TTACGACGAA GCCGGCAACT TTGCTTATCG CGTCGGTCTG CCCGGCAAGA GCGGAGTTGG CGGCGGGATT GTGGCGATTG TGCCGGAGCG CGCTTCGGTC TGTGTGTGGT CTCCTGCGTT GAACGCAGCG GGCAATTCCC TTGTCGGTAT GGCTGCGCTG GAAAAACTCA GCGCGAGGGT CGACTGGTCG GTTTTTTGA
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Protein sequence | MHDLLNEILD EVRPLLGQGK VADYIPALGG VRPDQLGIAV YGNDGQVFSA GDAETLFSIQ SISKVFSLVQ AIGHSGEDIW QRLGHEPSGQ PFNSLVQLEF EQGRPRNPFI NAGALVICDI NQARFAAPSL SMRDFVRRLC GNRSITSDSK VAESEYQHRS RNAAAAYLMK SFDNFHGDVE DVLRSYFHHC ALSMNCIDLA KAFGFLANQG FCAHSGVQIL TARQATQVNS IMATSGLYDE AGNFAYRVGL PGKSGVGGGI VAIVPERASV CVWSPALNAA GNSLVGMAAL EKLSARVDWS VF
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