Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2481 |
Symbol | tonB-2 |
ID | 1184133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2741606 |
End bp | 2742427 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637393854 |
Product | tonB protein |
Protein accession | NP_792293 |
Protein GI | 28869674 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAATG TCCAGACCGC AGCCAGCGCA CATGATGTGC TCTGGCGCCA GACGCCAGGT GGCGACCTGG TCGATCTGGG GCGTCCTTTC CGTGGGCCTT TGGCGTTGTC GAGGTTGCAC AGCACCCCCA AACCGATCCT CGGGCGGCGC GAAGCCATTC TGCTCGGTGC GCTGGCGCTG GTGTTCCACG GCGCGGTCGT TTACTGGCTG AGCCAGAACC CGACGCCTGC ACTGCCGGTC GTGCCGCCGG AAATCCCGCC GATGACCATC GAGTTCTCTC AGCCCGCGCC ACCTGTGGTT GAAACTCCGC CGCCACCGCC AGAGCCGGTT GTACAGCCGG TGGTCGAGCC GCCGCCTCCT GTCGAGGACG AGTTGGCCGT CAAGCCGCCA CCGCCCAAAC CGATTCCCAA ACCCAAGCCG CAGCCGCCTA AGCCGGTGGT CAAGCCTGTC GCCAAGCCGG TAGAGCAACC ACCGGCGCCA CCTGTGCCTG CGCCACCCGT TGCTGCGCCC GCGCCACCTG CGCCACCTGC GCCGAAACCG GTGACCCCGG CCTCGGCCAG CGCGGGCTAC CTGCGCAATC CGGCACCGGA ATATCCGTCG CTGGCCATGC GTCGCGGCTG GGAAGGCACC GTGCTGTTGC GCGTCCATGT ACTGGCCAGC GGCAAGCCCG GCGAGATTCA GATACAGAAA AGCAGTGGCC GCGATCAACT GGATGACGCA GCGCTGGCCG CGGTGAAACG CTGGAGTTTC GTACCCGCCA AACAGGGCGA CGTCGCCCAG GATGGCTGGG TCAGCGTGCC GATTGATTTC AAGATCAAAT AG
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Protein sequence | MGNVQTAASA HDVLWRQTPG GDLVDLGRPF RGPLALSRLH STPKPILGRR EAILLGALAL VFHGAVVYWL SQNPTPALPV VPPEIPPMTI EFSQPAPPVV ETPPPPPEPV VQPVVEPPPP VEDELAVKPP PPKPIPKPKP QPPKPVVKPV AKPVEQPPAP PVPAPPVAAP APPAPPAPKP VTPASASAGY LRNPAPEYPS LAMRRGWEGT VLLRVHVLAS GKPGEIQIQK SSGRDQLDDA ALAAVKRWSF VPAKQGDVAQ DGWVSVPIDF KIK
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