| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2474 |
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| Symbol | |
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| ID | 1184126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2732375 |
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| End bp | 2733325 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393847 |
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| Product | DNA/RNA non-specific endonuclease |
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| Protein accession | NP_792286 |
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| Protein GI | 28869667 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.169636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCTGACA AGAAACTCAA AATCGACCTT GCCTACCGCC CCCGCCTCGC CGACCTCAAG
CCTTTAAACG TGCCGGCCGC ATTGCTTGCG CAGCAACCAC AGACACTGGC TGCACCACGT
ACCACCCCTG CGAGCGAACT GAAAAAGCGT CAGGGTTACG CCGAAAACTT CCTCGGAGAT
TTCGTGGTGC CCTGGCCTGC GGTCGACGCC GAGCTGGCAG CCGATGTCTA TCCGCTGGAC
AACACCGGCA ATCGCCTTGA TTACACGCAC TTTTCCATCA CCATGTCGCG CAGTCGACGC
CTGGCGCTGT ACGTCGGCGT CAATATCGAT GGTGCCAGCA GTGTTGAGGT CAAGCGGGGC
AAGGATGCGT GGTCTTTCGA CGGTAGATTG CCCGCCGAGG CGCAAATCGG TGAAAGCGTC
TACGCCGACA ACTTGCTGGA TCGCGGCCAT CTGGTCAGGC GCCAAGACCC CAACTGGGGC
AAGGAAGCCG AAGTGGCCAA CAGCGACACG TTTCATTTCA CCAACTGTTC GCCGCAGATG
GCGGCGTTCA ATCAAAAAAC CTGGCTGGAG CTTGAGGATT ACATTCTCGA CAACACCCGT
CGCTGGAAAT CCCGGGTAAC GGTGTTCAGC GGGCCGGTGC TGCGCGACGA CGACCGCAGT
TACCGGAACA TAAGGGTGCC CTTGGCATTC TGGAAGGTCG TGGCGTTTGT CGGCGACGAC
GGTAAGCCTT CGGCCAGCGC CTACATGATC GACCAGAGCC GCGAGCTGGG TCAGTTGGAC
ATCATGTTCG GCCAGCTCAA AACCTGGCAA CGCAGCGTCT TGCAGATCGA GCAGCTCACC
GGCATACATT TCGGAGCGCT GGCTGGCTAC GACGGTTTCT CCAACGAAGA ACGCCTGACC
GGCACGCGAA TCGAAGCACG GATACGCGGG CCGCAGGATA TTCGCGTCTA G
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| Protein sequence | MPDKKLKIDL AYRPRLADLK PLNVPAALLA QQPQTLAAPR TTPASELKKR QGYAENFLGD
FVVPWPAVDA ELAADVYPLD NTGNRLDYTH FSITMSRSRR LALYVGVNID GASSVEVKRG
KDAWSFDGRL PAEAQIGESV YADNLLDRGH LVRRQDPNWG KEAEVANSDT FHFTNCSPQM
AAFNQKTWLE LEDYILDNTR RWKSRVTVFS GPVLRDDDRS YRNIRVPLAF WKVVAFVGDD
GKPSASAYMI DQSRELGQLD IMFGQLKTWQ RSVLQIEQLT GIHFGALAGY DGFSNEERLT
GTRIEARIRG PQDIRV
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