| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2473 |
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| Symbol | |
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| ID | 1184125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2731062 |
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| End bp | 2731982 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393846 |
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| Product | periplasmic substrate-binding protein |
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| Protein accession | NP_792285 |
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| Protein GI | 28869666 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.265832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCAAT GGTTATCGAT TTCTCTGGGC GCCAGCCTGC TGTTTACAGG CCTTGCGCAC
GCCAGCACAC CCTTGATTGG TGTGGGCATG GCCAAATATA ACGACAACTT CCAGACCATC
CTGCGCCACG GCGTGGAGAA GCAAGTCGCC GTGATGGACG CCGACATTTT CATGGAAAAC
GGCCAGGACG ATGTCGAGTT GCAGATGCGT CAGTTCCGCA ACCTGGTCAG CTCGAAAGTC
GACGCGATTG TTGTCGCGAT GGTCAATGGC AAGAGTGCGC CGGAGATGAT GCGCCTGGCC
AGCGAGGCCA AGGTCCCGCT GGTGTTCGTC AACCGCAATC CTGACCCTGC CAAATGGCCC
GCGCAGACTG CATTTGTTGG CTCCGATGAG CTGGAGTCCG GCACCCTGCA AATGGAAGAG
CTCGCTCGCC GTGCGAATTA CAAGGGCAAT GTAGTGATTC TGGTCGGCGA CCCGAGCAAC
AAGTCGTCGG TCATGCGCAC CGAGGACGTG GAGAAGGTCG TCGCCAAGTA CCCGAACATG
AAGGTGGTGC AGAAGAAAAT CGGCAATTGG GAGCGCAGCC AGGCCGCGAC CATCCTGGTT
GATTGGGTCA AGCAGGGAGT GGACTTCTCG ATCGTCGCCG CCAACAACGA CGAAATGGCC
ATTGGCGCGA TCATGGGCCT GGAGAAGGCT GGCAAGAATG CCAAGGACTA TCTGGTGGGC
GGCATCGACG GCACCCCGGA CGGATTGAAG CTGATGGCCG AAGGCAAGAT GGCCGTGAGC
GTGTTTCAGG ACGCCGTCGG CCAGGCCAAC GGTGCGGTTG ATGCGGCACT GAGTATGGCG
CGTGGCGAAA CACTGGCATC CCCGGTGATT TGGGTGCCGT TCAAACTCAT TACCCCGGAG
AACCGGCAGG AATTCGAGTA A
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| Protein sequence | MKQWLSISLG ASLLFTGLAH ASTPLIGVGM AKYNDNFQTI LRHGVEKQVA VMDADIFMEN
GQDDVELQMR QFRNLVSSKV DAIVVAMVNG KSAPEMMRLA SEAKVPLVFV NRNPDPAKWP
AQTAFVGSDE LESGTLQMEE LARRANYKGN VVILVGDPSN KSSVMRTEDV EKVVAKYPNM
KVVQKKIGNW ERSQAATILV DWVKQGVDFS IVAANNDEMA IGAIMGLEKA GKNAKDYLVG
GIDGTPDGLK LMAEGKMAVS VFQDAVGQAN GAVDAALSMA RGETLASPVI WVPFKLITPE
NRQEFE
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