| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2454 |
|---|
| Symbol | purU-2 |
|---|
| ID | 1184106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 2710939 |
|---|
| End bp | 2711805 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637393829 |
|---|
| Product | formyltetrahydrofolate deformylase |
|---|
| Protein accession | NP_792268 |
|---|
| Protein GI | 28869649 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
|---|
| TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.160682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACACG AGAAGAACCA TTTCATCCTG AAGATCAGCT GCCCGGCGAC TTCCGGCATT
GTCGCGGCGG TGACTTCCTA CCTGGCTGGC AACAGCTGCT ACATCGGTGA AATGGCCCAG
TTCGATGACG AGTTCAGCGG TACCTTTTTC ATGCGCGCGG TGTTTCGCTT CAACGATGGT
CACGACGGCG ATATCCAGCA GTTAAAGGCC GGATTCGATG CGGTGGCCAA GGACTTTGCC
ATGCAGTGGG AGCTGCATGA CACGCGTCGG CCGATGCGTG TGCTGTTGAT GGTCAGCAAG
TTCGATCACT GCCTGACTGA CCTGCTGTAT CGCCATCACA AGGGCGAAAT GGACATGACC
ATCACCGCCA TCGTGTCCAA CCACCTGGAC TTGCGAGCAA TGGCCGAGCG TGAGGGCATT
CGCTTTATTT ACCTGCCCGT GAGCAAAGAC ACCAAGGCCG CGCAGGAAGC TGCGCTGATG
AAAGTGGTCG ATGAAACCGG CACTGAACTG GTGGTGCTGG CGCGTTACAT GCAGATTCTC
TCAGATGACT TGTGCAGGCA GCTTGCAGGC CGGGCGATCA ACATCCATCA CTCGTTTCTG
CCGGGTTTCA AGGGCGCCAA GCCGTATCAC CAGGCTTACG AGCGTGGCGT GAAGCTGATT
GGCGCGACCG CGCATTACGT CACCAGCGAT CTGGACGAAG GCCCGATCAT CGAGCAGGAA
GTGCAGCGTG TCGATCACGT TTACCTGCCG GATGATCTGG TCGCCGCAGG CCGCAACAAC
GAAACCATCG CGCTTTCCAG GGCGGTGAAA TACCACTTGG AACATCGGGT GTTTCTCAAC
ACGGACCGAA CGGTGATCTT TCGATGA
|
|---|
| Protein sequence | MQHEKNHFIL KISCPATSGI VAAVTSYLAG NSCYIGEMAQ FDDEFSGTFF MRAVFRFNDG
HDGDIQQLKA GFDAVAKDFA MQWELHDTRR PMRVLLMVSK FDHCLTDLLY RHHKGEMDMT
ITAIVSNHLD LRAMAEREGI RFIYLPVSKD TKAAQEAALM KVVDETGTEL VVLARYMQIL
SDDLCRQLAG RAINIHHSFL PGFKGAKPYH QAYERGVKLI GATAHYVTSD LDEGPIIEQE
VQRVDHVYLP DDLVAAGRNN ETIALSRAVK YHLEHRVFLN TDRTVIFR
|
|---|
| |