| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2451 |
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| Symbol | soxD-2 |
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| ID | 1184103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2708498 |
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| End bp | 2708803 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393826 |
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| Product | sarcosine oxidase, delta subunit |
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| Protein accession | NP_792265 |
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| Protein GI | 28869646 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4311] Sarcosine oxidase delta subunit |
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| TIGRFAM ID | [TIGR01374] sarcosine oxidase, delta subunit family, heterotetrameric form |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0164476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATCA TGACTTGCCC GCTCAACGGG CCGCGCAACA TCAGCGAGTT CACCTACGGC
GGCGAATTCA AACCCATGCC CGACCCGCAG ACCTGCAGCG ATGCCGAATG GGCCGACTAC
GTGTTCAACA GTGAAGACAC CCTGGGCGTG GTGCGTGAAT GGTGGATGCA CACCCCGACC
AATTACTGGT TTCTGGCCGA ACGCCATACC GGCAGCGACG AGATCATTCG CACCTTCGAC
CCGAGGGAGA TCTTCACCAC TCGCATGGAC TTCGCCCCCG CCCCTTCCAA GGAGATCGCA
GGATGA
|
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| Protein sequence | MKIMTCPLNG PRNISEFTYG GEFKPMPDPQ TCSDAEWADY VFNSEDTLGV VREWWMHTPT
NYWFLAERHT GSDEIIRTFD PREIFTTRMD FAPAPSKEIA G
|
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