| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2441 |
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| Symbol | |
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| ID | 1184093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2695933 |
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| End bp | 2698065 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637393816 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_792255 |
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| Protein GI | 28869636 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.323327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACCA CCACAGAAAG CACCCTCAAG GACAGAGCCG AGGTACAGCT GGACCTTCAT
TCGCTGATGG TAGCCATTGA CCGGTCTCAG GCAATGATCG AGTTCGATCT CGAAGGCAAT
ATCCTGCGGG CCAACGCCAA CTTTCTGGAG TGCGTCGGGT ATCGGCTGGA GGAAGTTCAG
GGTCGCCACC ACCGTATGTT CTGCACCCCG GAATACGCCT CCAGCGTCGA GTACGCATCG
TTCTGGGAGA CCCTCGGCAA GGGTGCTTTT GATGAAGGGC AATACAAACG TCTTGGCAAA
AATGGTCGCG AGATCTGGTT GCAGGCGACC TATAACCCGG TTTTTGACGA ACAGGGCAAC
CCGTTCAAAG TGGTGAAGTT TGCCACCGAC GTGACTCAGC AGCGCAAGAC CCACGCCGAG
TATGAAGGCA AGGTCGCGGC TATCGATCGC TCCCAGGGCA TCATTGAATT CGATCTGAAC
GGTCGGGTGC TCAATGCCAA CGAAAACTTT CTCAAGGTGC TGGGTTATCG TCTGGATGAA
ATCCAGGGCC AGCATCACCG CATGTTTTGT GACGACGATT ACCTGAACAG CCCGGCCTAC
CGTGCGTTCT GGGCCAAGCT TGAACGTGGC GAATATGACT CCGGCGAATA CAAGCGCGTC
GGCAAGAACG GTCGCGAGCT GTGGATCAGT GCCACCTACA ACCCGATCTT CGATCCGGAC
GGTCGCCCTT ATAAAGTGGT GAAGTTTGCC AACGACGTCA CTGAGAGCCG AGCCCGTCAG
GCCGAGTACG CGGGCAAAGT TACCGCTATC GAACGTTCCC AGGCCGTTAT TGAATTTGAC
CTGACCGGCA GAGTGCTGAC GGCGAACCGC AACTTTCTGG CGGTGTTCGG TTACGATCTG
GACGAAGTTG TCGGTGAACA CCACCGCATG TTCTGTTCCG AGGAGTTTGT CAGCAGCCTG
CAGTACCGCG AACTGTGGGA AAAACTCGGT CGTGGCGAGT ACGACGCCAA CGAGTACAAG
CGCAAACGCA AGGACGGCAA GGAAATCTGG ATTCAGGCGA CCTACAACCC GATCTTCGAT
GCGCAGGGCA AACCCTACAA GATCGTCAAG TTCGCACTGG ACGTGACCGA AGCGAAGGAA
ACCAGTGTCG AGGACAAGGG CAAGGTCAAT GCCATTAATC GCGCTCAGGC GGTTATCGAA
TTCGACATGG CCGGTAATAT TCTGGCGGCC AACGCCAACT TCCTCAAAGC GCTGGGTTAT
GGCCTTCAGG AAATAAAGGG CCAGCACCAC CGCATCTTTT GTGAAGAAGA ATACGTGCGC
GGCACCGAAT ACCGTGAGTT CTGGCACGGG CTGGGGCAGG GCGAGTTCCA CTCCGGGCGC
TTCATGCGGG TCAGCAAATA CGGGCAGAAA ATCTGGATTC AGGCGACTTA CAGCCCGATC
TTCGACCACG ACGGTCTGCC GTTCAAGGTC GTTAAATTTG CCACCGATAT CACCCGCCAG
GTTGAGATGG AGCAGGCGAT TGAAGCCAAG ACCCGCGCCA TGGGCGAGTC GGTGAAGGCG
TTGATGAACG CTATTTCTTA TGTAGCGCAG AGCACCGACA CCGCCACCGA GCTTGCCAGG
TTGACCCGCG AGCAAGCCAG CAGCGGTTCA CAGACGCTGG TCAAGGCGTC CGATGCCATG
GACATGATTG CCAAGTCGGC CGAGGGTATT CAGGACATCA TTCAGGTGAT CAGCGAGATC
GCCAGCCAGA CCAACATGCT GGCGTTCAAC GCAGCCATCG AGGCCGCCAG AGCCGGTGAG
CACGGCCTTG GCTTCTCTGT CGTCGCCGAT GAAGTGCGCA AGCTTGCCGA AAAGTCCTCG
CGGGCCACCA AGGAAATCAA CAAGCTGATT CTCGAAACGG TAAGCCGCAT CGAGTCGGGC
AACGAGATCT CCCGCAGTGC CGGCGAGGCG TTCGAGCATA TTGTGAACGG CGTGATGCAG
ACCACTCAGG CGATCGACGG CATCAACACC GCAACCGAGA AGCAGCGCTT GTCAGCGCAG
GAGGTCGAAA CATTGATCAC CGAGCTGCAT AAAGCCAACC TGACCAGTTA CAGCCAGACC
CTGGACAAGG GATCCATCGG ACAACCTGCA TGA
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| Protein sequence | MSTTTESTLK DRAEVQLDLH SLMVAIDRSQ AMIEFDLEGN ILRANANFLE CVGYRLEEVQ
GRHHRMFCTP EYASSVEYAS FWETLGKGAF DEGQYKRLGK NGREIWLQAT YNPVFDEQGN
PFKVVKFATD VTQQRKTHAE YEGKVAAIDR SQGIIEFDLN GRVLNANENF LKVLGYRLDE
IQGQHHRMFC DDDYLNSPAY RAFWAKLERG EYDSGEYKRV GKNGRELWIS ATYNPIFDPD
GRPYKVVKFA NDVTESRARQ AEYAGKVTAI ERSQAVIEFD LTGRVLTANR NFLAVFGYDL
DEVVGEHHRM FCSEEFVSSL QYRELWEKLG RGEYDANEYK RKRKDGKEIW IQATYNPIFD
AQGKPYKIVK FALDVTEAKE TSVEDKGKVN AINRAQAVIE FDMAGNILAA NANFLKALGY
GLQEIKGQHH RIFCEEEYVR GTEYREFWHG LGQGEFHSGR FMRVSKYGQK IWIQATYSPI
FDHDGLPFKV VKFATDITRQ VEMEQAIEAK TRAMGESVKA LMNAISYVAQ STDTATELAR
LTREQASSGS QTLVKASDAM DMIAKSAEGI QDIIQVISEI ASQTNMLAFN AAIEAARAGE
HGLGFSVVAD EVRKLAEKSS RATKEINKLI LETVSRIESG NEISRSAGEA FEHIVNGVMQ
TTQAIDGINT ATEKQRLSAQ EVETLITELH KANLTSYSQT LDKGSIGQPA
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