Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2435 |
Symbol | |
ID | 1184087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2687499 |
End bp | 2688914 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637393810 |
Product | oxidoreductase, FAD-binding, putative |
Protein accession | NP_792249 |
Protein GI | 28869630 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0684957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTGGAC AAGCACGCGG GTTAAATGAA AAAGAAACGG TTTGCATGAG CGATAAATCG GTCAACTTAT TAAAGTCTGC TATTGATGGG TGTGTCTTGA CTCCGCGCGA TCCCGAGTAC GGTGACGCCA GGCTTATCTA TAATCGAATG CATGATTCTA TGCCGGCTGC CATCGTTTAT CCTGAACACG TTGCCGACAT CAGGACCTCT GCCTTAATGG CTGCAAAAGA AGGTGTTTCG TTCGCCATGA GAGGAGGAGG GCATCATATA GCAGGCTTTA GTACATGCGA TGGCGGTATC GTGCTGGATT TTAAAAAGTG GAAAAATATC ACGTTAGACG TCACGACAGG CATCTTGGCT GTTCAGCCAG GAGTGCGGCT TGCAGAAATT GATGAATTTC TTGTAAGCAG AAATCTGGTG ATTCCTACAG GTACAGTCAG CGATACAGGC TTGATAGGCT TGACGCTGGG CGGAGGCATT GGTTGGTTAG TCGGCCTGTA CGGTCTTACG TGTGACTGTC TCGTAGGGGC CGATGTCGTG CTTGCCGATG GTCGATTAGT TAAAGCTGAA GACAGTGAAC ACGGTGACTT GCTGTGGGCG CTCAAAGGTG GCAGTGGCGG ATTTGGTGTC ATCACCGAGT TGCGGTACAG ACCCTTGCCT CTGCCTGCAA CCTATTGTGG CTCAGGGAGT GTTTCACTTG CCGATACCGA AGCGTGTCTA TCTCGTTTGG TATTTTTTCT AGAGACGCAA TGCCCCGGAG AGCTGACCGT CGCACCCAAT TTTTCCCGAG CCGTATCAGG CGACGTGGTT ATGAATATTG ATTATTGTTA TTCAGGTACT GCGATCCGAT GGATCGACAC GTTGCAGGCG CTGATTCCCG AAGCCACGTG GGAAGCCGTC ACGCGCTGGG ACTTTCGCGA CTGGCAACGA AATTTCGATG CCAAATTTTT ACCCCCCATG CGTGGTTATT GGAAGTCGTC TTATACACCG TCCTGGGGGC TGGATTTTTC TTTGCTTGGC ACACTGATGC AGAACGCGCC CGAAGGCAAT TGCTCTATCC TGATTGAGCA CCTTCACGGA CGGTTTTGCG ACAGCGATGA CGCTCATTCA GCATTCCCAT TAAGAGAGGC TCGTTTTGGC GTACTATTTT CTGCCCGCTG GTTGTCGGAA AGCGAGGATG CCGATTACAT AGCGTGGGTG AAGAATGGAA TCTTTTCTGT TGATCCTCAA GGGCGCTCTC TTTCGTATTC AAACTATACA TCTGCAGATG ATGTGGGCGC GGCTAAATCA TTTTCAAAGC TTAGCCGTGC AAGGCTTTTT TCCATTAAAA GCGTTTATGA TCCTGATCAT TTTTTTAAGG GTAATCATGG TTCGTTGCTC TTTGCGGGCA GTGGCGAAGT CCACAGAGTT CAATGA
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Protein sequence | MSGQARGLNE KETVCMSDKS VNLLKSAIDG CVLTPRDPEY GDARLIYNRM HDSMPAAIVY PEHVADIRTS ALMAAKEGVS FAMRGGGHHI AGFSTCDGGI VLDFKKWKNI TLDVTTGILA VQPGVRLAEI DEFLVSRNLV IPTGTVSDTG LIGLTLGGGI GWLVGLYGLT CDCLVGADVV LADGRLVKAE DSEHGDLLWA LKGGSGGFGV ITELRYRPLP LPATYCGSGS VSLADTEACL SRLVFFLETQ CPGELTVAPN FSRAVSGDVV MNIDYCYSGT AIRWIDTLQA LIPEATWEAV TRWDFRDWQR NFDAKFLPPM RGYWKSSYTP SWGLDFSLLG TLMQNAPEGN CSILIEHLHG RFCDSDDAHS AFPLREARFG VLFSARWLSE SEDADYIAWV KNGIFSVDPQ GRSLSYSNYT SADDVGAAKS FSKLSRARLF SIKSVYDPDH FFKGNHGSLL FAGSGEVHRV Q
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