Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2431 |
Symbol | |
ID | 1184083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2684150 |
End bp | 2685067 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637393806 |
Product | hypothetical protein |
Protein accession | NP_792245 |
Protein GI | 28869626 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000928736 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAC TGACTGATGT TGAATGGAAT GCTTTTGCAC TACCAGCCAA TTTGGCTGAC GGTCATGCTT ATCATGATAT GCATGTGGCG TTCATGGAGA TCATGAAGAA TTTGGAACGC ATTTGGAGTG AGGCCGACAA AATAACACCA CCTCGCATGG CTCTTGATTT TAAAAATAGC TTCAGTCGTC TTATAAAATC GCCGTCCTTG ATGCCGCACA CTCACTATAA GATTTGCCCA AGCGCCTCTA ATTCCATAGA TTTAATTGCC GCTTTTTTAC ACGGTAAGAA TATTAGGACG GTACTGGTGG AGCCGACATT TGATAATTTG GCGCTTCTTC TTCAACGCCG CGGGGTAACC GTTGACTCGG TCTCTGAAGA CAATTTAACA CATCATCTGG TGGACGGTAA TTTTGATTCA ATACCTGCTA TTAAAACCGC CGAAGCAGTC TTCATTGTGT CTCCCAATAA TCCAACGGGG TATACCTTGA GTCTACAGGA ATTCAAGACG TTGGTGGCGT ACTGCAAACG CACTGAAAAG TTATTGGTGG TCGATAACAG TTTTCGTTTT TTCAACCGGC AGGGCTATGA TGATTATCAG GTTTTACTGG AGTCCGGGGT GAATTTTATT GCTTTTGAAG ATACGGGAAA AACGTGGCCG ACTCAAGATT TGAAGGCGAG CCTCATAATT TATTCAGACA CGGTCAAAGT TTTTTTTGAA TCGCTCTACA ATGAGATTTA CTTGTGCGTA TCCAATTTCG TTCTTCATTT ATTTTCACAC CTCTTCGATG CGACATCGGC AGTGGGGTTG AAGTCTGTAC TCTGGGATGT CGTGGACAGT AACCGAGCAC TGTTAAGAGA GACGTTGCAA GGGAGCGTAT TGCGAATTTC TGAAACGTCT AAGGAAGGTC TGAAGTAG
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Protein sequence | MNTLTDVEWN AFALPANLAD GHAYHDMHVA FMEIMKNLER IWSEADKITP PRMALDFKNS FSRLIKSPSL MPHTHYKICP SASNSIDLIA AFLHGKNIRT VLVEPTFDNL ALLLQRRGVT VDSVSEDNLT HHLVDGNFDS IPAIKTAEAV FIVSPNNPTG YTLSLQEFKT LVAYCKRTEK LLVVDNSFRF FNRQGYDDYQ VLLESGVNFI AFEDTGKTWP TQDLKASLII YSDTVKVFFE SLYNEIYLCV SNFVLHLFSH LFDATSAVGL KSVLWDVVDS NRALLRETLQ GSVLRISETS KEGLK
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