| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2424 |
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| Symbol | |
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| ID | 1184076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2674609 |
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| End bp | 2675568 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393799 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
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| Protein accession | NP_792238 |
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| Protein GI | 28869619 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.538239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAC TCGTGATAGC CAGCCAACTG GAAGATGAAT TCAATCTGGT AATCCGCGAG
CGGCTTGCAG TAACCCATCC TGAAGCGAGG GTCATCGGCG TACCGGCCGG GGTGCCCAGC
GACCTGCCTG CCGAGGTCAG TATTCTGCTG GCGCGACCGA TCAATGTCCG AGGCTACGAA
GCACCCGCCT CGCCGCCACC GGGCTGGCCT TATGGCCTGA AATGGATTCA GGTGGTGTCT
TCCGGCATCG ATTTCTACCC GCCCTGGCTG TTCGACGGCC CGCCGGTGAG TACCTCACGG
GGCAGCGCGG CAGAAAACAT CGCAGAATTC TCGCTGGCCG CGATTTTTGC TGCAGCCAAG
CACCTGCCCG ATATCTGGGT GCATGACTCG CAATGGAATT TCACCGCCCT GACGCCGCTC
AAGGGCACCA CGCTGGGGAT TCTCGGTTTC GGTGCCATCG GCCGCAGCCT GGCCAGCAAG
GCACAGGCAC TGGGTATCAA AGTGGTTGCG TTGCGGCAGA GTTCGGCCCC TTTCGAGGTT
GAAGGCGTCG AAGCCGCACG CGACATCCAC GACCTTTTCT CCCGCGCGGA CCACTTGGTA
CTGGCCGCGC CGCTGACACC GGCCACCCGG CATATCGTCA ACGCCGACGT GCTGGGCAGT
GCCAAACCGG GCCTGCACCT GATCAACATC GCCCGTGGCG GCCTGCTTGA TCACGAGGCG
CTGCTCACGG CGCTGGATCA AGGCAGCATC GGTCTTGCCT CGCTTGACGT CACCGAGCCC
GAGCCGCTGC CGGACGGCCA TCCACTGTAC TCACACCCGC GAGTGCGCTT GTCACCGCAC
ACCTCGGCGA TTTCCAGCAA CAGCCACCAT GAGATCGCCG ACAGTTTTCT GGCCAATCTG
GACCGTTTTG TGAATGGGCA GGCCTTGCAC AATCAGGCTG ATCGCCAGCG CGGGTATTGA
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| Protein sequence | MTQLVIASQL EDEFNLVIRE RLAVTHPEAR VIGVPAGVPS DLPAEVSILL ARPINVRGYE
APASPPPGWP YGLKWIQVVS SGIDFYPPWL FDGPPVSTSR GSAAENIAEF SLAAIFAAAK
HLPDIWVHDS QWNFTALTPL KGTTLGILGF GAIGRSLASK AQALGIKVVA LRQSSAPFEV
EGVEAARDIH DLFSRADHLV LAAPLTPATR HIVNADVLGS AKPGLHLINI ARGGLLDHEA
LLTALDQGSI GLASLDVTEP EPLPDGHPLY SHPRVRLSPH TSAISSNSHH EIADSFLANL
DRFVNGQALH NQADRQRGY
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