| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2416 |
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| Symbol | |
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| ID | 1184068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2663787 |
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| End bp | 2664929 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393791 |
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| Product | branched-chain amino acid ABC transporter, permease protein |
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| Protein accession | NP_792230 |
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| Protein GI | 28869611 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACA TGACTGAAAA GCCGCTGACC GCGACGCCGG TCAAAGCGGG CCGAGCAGGC
TGGCTGAGCG CGGGCTGGTT GCCGCTGATC GAGCGTTACA GCCTGATCTG GCTCTCCCTC
CTGTTGTTGG TGGTACTGCC GCTGATACTG GGCGACTTCC GTCTCGGGCT GGCGGGCAAA
TACCTGAGCC TGGCGTTCTG CGCCGTGGGC ATGGTGATGA TCTGGGGTTA CGGCGGCATT
CTCAGCCTCG GCCAGGGGAT CTTTTTCGGC CTGGGCAGCT ACATGATGGC GATGTACTTG
AAGCTGGAAG CCACCGCCAC CGACGAAGCT GCCAGCGCCC TCGCCGCGTT CTACGGCTCG
GCCCTGCCGG ACTTCATGAT CTGGAACAGC GTCGAAGCCC TGCCTTGGTG GTGGAAGCCA
TTCGAGTCGG CAACCTTCAC TCTGGCTGCC ATTCTGATCC TGCCTGCGCT GCTGGCGTTT
CTGTTCAGCT ACGCCTACTT CAAGAAACGC GTCGGCGGTG TGTACTTCTC GATCATCACC
CTGTCGCTGG CCTCGATCAT GTCAATCATG ATCATCGGCC AGCAGGGCTA CACCGGTGGC
GTCAACGGCC TGACCGACTT CAAGACCGTG TTCGGCCTGA GCCTGCAAAC GCAGCAGACG
CCGTGGATTC TCTACCTGAT CACCACGCTG TTGCTGCTGG CCAGCGTAGC GATGTGCGGG
TTCATCCTGC GCAGCCGCCT GGGCAAGGTG ATCGTCGCGA TCCGTGACCG CGAAGACCGG
GTGCGTTTTT CCGGCTACAA CACCGCGCTG TTCAAGGCGT TCATCTTTGC CGTCGCAGCG
CTGATCTCGG CGCTGGGTGG CGTGATGTTC ACCTTGCAGG TCGGCCTGGC CTCGCCGTCA
CTGGTGGGCA TCATTCCGTC CACCGAAATC GTCATCTACG CCGCGCTGGG CGGTCGTCTG
TCCCTGGTCG GTGCGGTGTA CGGCACGTTG CTGATCGGCG CGGCCAAAAC CTATCTGTCG
GAGAACTTCG TGAGTTTCTG GCAATACTTC ATCGGCTTTC TGTTCATGGG CGTGGTGCTG
TTCCTGCCAA CCGGGCTGGC CGGCTTGCTG CAACGCCTGA GCAACAAGGA GGTGCAGTCA
TGA
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| Protein sequence | MNNMTEKPLT ATPVKAGRAG WLSAGWLPLI ERYSLIWLSL LLLVVLPLIL GDFRLGLAGK
YLSLAFCAVG MVMIWGYGGI LSLGQGIFFG LGSYMMAMYL KLEATATDEA ASALAAFYGS
ALPDFMIWNS VEALPWWWKP FESATFTLAA ILILPALLAF LFSYAYFKKR VGGVYFSIIT
LSLASIMSIM IIGQQGYTGG VNGLTDFKTV FGLSLQTQQT PWILYLITTL LLLASVAMCG
FILRSRLGKV IVAIRDREDR VRFSGYNTAL FKAFIFAVAA LISALGGVMF TLQVGLASPS
LVGIIPSTEI VIYAALGGRL SLVGAVYGTL LIGAAKTYLS ENFVSFWQYF IGFLFMGVVL
FLPTGLAGLL QRLSNKEVQS
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