Gene PSPTO_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2407 
Symbol 
ID1184059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp2656519 
End bp2657163 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content58% 
IMG OID637393783 
Producthypothetical protein 
Protein accessionNP_792222 
Protein GI28869603 
COG category[R] General function prediction only 
COG ID[COG2085] Predicted dinucleotide-binding enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.263259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATCG GTATTATCGG TTCTGGCGCG CTGGGCTCAG GCATTGCTCG TATCCTTGCC 
AGCAAAGGCA TTTCGGCCAT TATTTCAAAC AGTCGCGGCC CGGAGTCGCT TGCCTCGCTG 
GTCAGGGAGC TCGGCGGGTC CATCAAGGCG GGCACCGCAG AAGAAGCCGC ACGTGCAGAT 
ATCGTCTTCG CTGCAGTGCG CTGGGTGGAT GCGGAAAAAG TATTGAGCAG CCTGCCGGCC 
TGGGAAGGGC GCATCGTGAT CGATGCAACC AACCCGGTGG AATTTATCGA TCCAGACTCC 
CCTGATGCAA ACGACCCGAC CAACCCGCTC GCGGCCTATG GCATCAAGGC GGTAGATTTG 
CATGGCAAGT ATTCAAGCGA AATTTTTCGT CAGTTCGTTC CGGGCGCGCG GGTCGTCAAG 
GCGTTCAATC ACCTTGATGC CAATGTGTTC TCGGCGCCTG AAGTAACGGG CGGCAAGCGC 
GTGCTGTTCT ATTCGGGTGA TGATGCTGCG GCAAAAACAG AAGTGCGCAA GATCATTGAG 
GACACCGGCT TCGTTCCGGT CGATCTGGGC ACCCTTGATG TGGGCGGCCC GCTGGCATCG 
CTTCCGTTCG GTCCGCTTGC TGCGCAGAAC TTTATCCGGG TCTGA
 
Protein sequence
MTIGIIGSGA LGSGIARILA SKGISAIISN SRGPESLASL VRELGGSIKA GTAEEAARAD 
IVFAAVRWVD AEKVLSSLPA WEGRIVIDAT NPVEFIDPDS PDANDPTNPL AAYGIKAVDL 
HGKYSSEIFR QFVPGARVVK AFNHLDANVF SAPEVTGGKR VLFYSGDDAA AKTEVRKIIE 
DTGFVPVDLG TLDVGGPLAS LPFGPLAAQN FIRV