| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2402 |
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| Symbol | |
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| ID | 1184054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2651761 |
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| End bp | 2652693 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393778 |
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| Product | transketolase, C-terminal subunit |
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| Protein accession | NP_792217 |
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| Protein GI | 28869598 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.730568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAGTG AGCATTTTGC CAGCGTGATG GTGGACGCGT TCATCGCGGC CGTTGACGAA
GGCCTCGACC TGGTGCCGGT GGTCAGCGAT TCGACGTCCA CCGCCAAGAT CGGCCCCTTC
ATGCAGCGCT TCCCGGAGCG CGTGATCAAC GTCGGCATCG CCGAGCAGTC GCTGGTCAGT
GTGGCTGCGG GCCTGGCGCT GGGCGGCAAG ATCGCCGCCA CCTGCAACGC TGCGCCGTTC
CTGATTTCCA GGGCCAACGA GCAGGTCAAG GTCGATGTCT GTTACAACCA GGCCAACGTG
AAAATGTTCG GCCTCAATGC GGGTACCAGC TATGGGCCGT TGGCGAGTAC CCATCATTGT
CTGGACGACA TTTCGGTCAT GCGCGGCTTT GGCAACGTGC AGATTTTCGC CCCGTCCGAC
CCGCTGGAGT GCCGGCAGAT CATCGATTAC GTCCTGCGTT ATCACGGCCC GGTGTACATC
CGCCTCGACG GTAAGCCGTT GCGTGAACTG CATGACCCCG GCTATCGCTT CGTACCGGGA
AACGTGGATA TTCTGCGCCA GGGTTCAGAC CTGACCATCG TCGCACTGGG TTCGGTGGTG
CACGAGGCGG TCGACGCTGC GGCGCAGCTG GCGGAGCAGG GGCTCGACGC GCAGGTCATC
AACCTGTCTT CGATTCGCCC GCTGCAGCGT GATGCGCTGC TCAGCGCCCT GAGCGGCAGT
CGCGGGGTGA TTACTGTTGA GGAACATAAT ATCAACGGCG GGCTTGGCAG CCTGGTGGCC
GAATTGCTGG CCGAGAATGC ACTTGGCATT ACCCTGATTC GCCTCGGCAT TGGTGATGGC
GAATACGCAG CAGCGGGTGC CCGTGAGCCG ACGCGTGCCT TGCATGGTAT CGATGCGGAC
GGCATTGTCG CGGCCGCTGC ACGTTTGCGT TAG
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| Protein sequence | MSSEHFASVM VDAFIAAVDE GLDLVPVVSD STSTAKIGPF MQRFPERVIN VGIAEQSLVS
VAAGLALGGK IAATCNAAPF LISRANEQVK VDVCYNQANV KMFGLNAGTS YGPLASTHHC
LDDISVMRGF GNVQIFAPSD PLECRQIIDY VLRYHGPVYI RLDGKPLREL HDPGYRFVPG
NVDILRQGSD LTIVALGSVV HEAVDAAAQL AEQGLDAQVI NLSSIRPLQR DALLSALSGS
RGVITVEEHN INGGLGSLVA ELLAENALGI TLIRLGIGDG EYAAAGAREP TRALHGIDAD
GIVAAAARLR
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