| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2401 |
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| Symbol | |
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| ID | 1184053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2650935 |
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| End bp | 2651771 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393777 |
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| Product | transketolase, N-terminal subunit |
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| Protein accession | NP_792216 |
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| Protein GI | 28869597 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3959] Transketolase, N-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.488371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCCT TCCGCTACGA TGCCCAGCAG ATCAAAGAAC AGGCACGCCT GATCAGGCGC
AATGTCATCA CCCTGAACGC CGGATCGCCT GCGGGAGGGC ACACGGGGGC CGACCTTTCG
GAAACCGACA TTCTGGCCAC GTTGTATTTC CGTATTCTCG ACATCAGCCC CGAGCGCATC
GAAGACCCGG AGCGGGATAT CTACATCCAG AGCAAAGGCC ACGGCGTCGG TGGTCTGTAT
TGCTGTCTGG CCCAGGCCGG TTACATTCCC GAAGCGTGGC TGCCTGAATA TCAGCACTTC
AATTCACGCC TGCCGGGCCA TCCGGTGCGG CAAAAAACGC CGGGCATCGA GCTCAATACC
GGTGCGCTGG GGCACGGCCT GCCGGTTGCA GTGGGCTTGG CGCTGGCGGC GAAAATGTCC
GGGAGCAACA AGCGAATTTA CGTGCTGACC GGCGATGGCG AACTGGCGGA AGGCTCGAAC
TGGGAGGCGG CGATGGCAGC CGCCAAGTAC GGCCTGGACA ACCTGTTTGT GATCGTCGAC
AAAAACAAAC TGCAGCTGGC CGGTCTGACG GCAGAGATCA TGCCGCTGGA CCCACTGGAT
GCGAAATGGG CGGCGTTTGG TTTCACGGTC AGCGAGTGCG ATGGCAACGA TGTCGGCCAA
CTGGTGACGG CGCTGGAACA CATGCAACTG CGCAAAGGCG CGCCTCAGGT GCTGATCGCC
CACACCATCA AAGGCAGGGG CGTGTCATTT ATCGAAGGGC GGCCTGAATG GCACCACCGG
GTGCCGAAAG GTGATGAAGT CAGCGCAGCA CTGGAGGAGT TGAATCATGT CGAGTGA
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| Protein sequence | MNAFRYDAQQ IKEQARLIRR NVITLNAGSP AGGHTGADLS ETDILATLYF RILDISPERI
EDPERDIYIQ SKGHGVGGLY CCLAQAGYIP EAWLPEYQHF NSRLPGHPVR QKTPGIELNT
GALGHGLPVA VGLALAAKMS GSNKRIYVLT GDGELAEGSN WEAAMAAAKY GLDNLFVIVD
KNKLQLAGLT AEIMPLDPLD AKWAAFGFTV SECDGNDVGQ LVTALEHMQL RKGAPQVLIA
HTIKGRGVSF IEGRPEWHHR VPKGDEVSAA LEELNHVE
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