| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2395 |
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| Symbol | |
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| ID | 1184047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2644361 |
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| End bp | 2645314 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393771 |
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| Product | transcriptional regulator, putative |
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| Protein accession | NP_792210 |
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| Protein GI | 28869591 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.129773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA TCGAAGAACA ACGGCTGATG AGCAAGATCG CCAGCCTCTA CTATGAAGAA
GGACTCAAAC AGTCCGAGAT TTCCACCCGG CTCGACCTGT CCCAGTCCTT CATCAGCCGC
GCCCTGCGCC GCGCCTTGCA GGAAGGCGTG GTGAAAATCA CCGTCATGCG CCCGCAGGGC
CTGCACCTGG AGCTGGAAAC CCGGCTACAA AAGATGTACG GCATACGCCA AGTGATCGTC
GTCGAAGCCA CCGAGCCGGA TGACGAAGAA AGCATCAAAC AAGCCATCGG CTCCGCCGCC
GCGCACTACC TGGAAACCAG CCTCAGCGCC CAGGACCACA TCGGCATCTC CTCCTGGAGC
AGCACCATCC GCGCGATGGT CAGCCACATG CACCCCCAGC CGGGCAAACA GAGCGCCCAG
GAAGTCGTGC AACTGCTCGG CGGCGTCGGC AACAAAGGCG CTTTCGAAGC CACCCTGCTG
ACCCAACGCC TCGCCACCCT GCTCAACTGC CCCGCCTTCC TCCTACCGTC GCAGAGCATC
GAACAGTCGG TGGAAAGCAA ACAACGCATC GTCGAAATGG AAGAAGTCAA AGAAGTCCTC
CACCGCTTCG ACAGCATCAC CCTCGCCATC GTCGGCATCG GCGAACTTGA ACCCTCACAA
CTGCTGCGCA ACAGCGGCAA CTACTACACC GAAGACATGC TGCGCGTGCT CGCTGAGCGT
GGGGCGGTTG GGGATATCTG CTTGCGGTAT TTTGATGCGC AGGGGAAACC GGTGCTGGAA
GAGGATGAGG AGTTTGTGGT GTCGATGGGG TTGGGTAAGT TGCGGTCGAT TAATCGGGTG
TTGGGGTTGG CTGGAGGGGT GAGGAAGGTG CAGGCGATTA AGGGGGCGCT GTTGGGGGGG
TATCTGGATG TGTTGATTAC GGATGTGGGG ACTGCGCGGG GGTTGGGGGG GTGA
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| Protein sequence | MSQIEEQRLM SKIASLYYEE GLKQSEISTR LDLSQSFISR ALRRALQEGV VKITVMRPQG
LHLELETRLQ KMYGIRQVIV VEATEPDDEE SIKQAIGSAA AHYLETSLSA QDHIGISSWS
STIRAMVSHM HPQPGKQSAQ EVVQLLGGVG NKGAFEATLL TQRLATLLNC PAFLLPSQSI
EQSVESKQRI VEMEEVKEVL HRFDSITLAI VGIGELEPSQ LLRNSGNYYT EDMLRVLAER
GAVGDICLRY FDAQGKPVLE EDEEFVVSMG LGKLRSINRV LGLAGGVRKV QAIKGALLGG
YLDVLITDVG TARGLGG
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