Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2385 |
Symbol | |
ID | 1184036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2634295 |
End bp | 2634651 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637393761 |
Product | transcriptional regulator, putative |
Protein accession | NP_792201 |
Protein GI | 28869582 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.170009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGAAC CAAGTCATAA CGACGAGCTA CCGCCGATCC CCGGCAAACG CTACTTCACC ATCGGTGAGG TCAGTGAGCT CTGCGCGGTA AAACCGCACG TTCTGCGTTA TTGGGAACAG GAATTTCCTC AGCTCAACCC CGTCAAGCGA CGCGGAAACC GCCGGTATTA TCAGCGCCTC GACGTGCTGA TGATCCGCCA GATCCGCGGT TTGCTTTACG ATCAGGGATT CACCATCGGT GGAGCCCGCT TGCGCCTCAC CGCCGGCGAA CCGAAGGACG ATACTCAGCA GTACAAGCAA ATGATTCGGG AAATGATTGC CGAACTGGAA GACGTACTGG TCATGCTCAA GGCTTAA
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Protein sequence | MLEPSHNDEL PPIPGKRYFT IGEVSELCAV KPHVLRYWEQ EFPQLNPVKR RGNRRYYQRL DVLMIRQIRG LLYDQGFTIG GARLRLTAGE PKDDTQQYKQ MIREMIAELE DVLVMLKA
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