Gene PSPTO_2379 details

Gene Information

• Locus tag: PSPTO_2379
• Symbol: infC
• ID: 1184030
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 2629307
• End bp: 2629840
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637393755
• Product: translation initiation factor IF-3
• Protein accession: NP_792195
• Protein GI: 28869576
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0845211
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACAAG ATAAACGAGC TGCACCCAAG GCCCCGATCA ATGAGAATAT CTCGGCCCGC 
GAGGTTCGTT TAATTGGCGC TGACGGCGAG CAGATTGGCA TCGTCTCGAT TGATGAAGCG 
CTTCGTATAG CCGAAGAGGC CAAGCTGGAT CTGGTAGAGA TTTCTGCCGA CGCAGTACCT 
CCGGTCTGCC GTGTGATGGA CTACGGCAAA TCGATCTTCG AAAAGAAGAA GCAGGTTGCT 
GCAGCGAAGA AAAACCAGAA GCAGATCCAG GTTAAAGAAA TCAAGTTTCG TCCAGGGACG 
GAGGAAGGGG ATTACCAGGT AAAACTACGC AACCTGGTAC GTTTCCTGAG TGACGGGGAC 
AGGGCCAAGG TATCGTTGAG ATTCCGCGGT CGTGAGATGG CCCACCAGGA GCTGGGTATG 
GAATTGTTGA AGCGGGTTGA AGGTGACCTT CTTGAATACG GTTCCGTCGA ACAGCATCCT 
AAGATGGAAG GACGCCAGCT GATCATGGTC ATCGCCCCGA AAAAGAAGAA ATAA 

 

Protein sequence

MRQDKRAAPK APINENISAR EVRLIGADGE QIGIVSIDEA LRIAEEAKLD LVEISADAVP 
PVCRVMDYGK SIFEKKKQVA AAKKNQKQIQ VKEIKFRPGT EEGDYQVKLR NLVRFLSDGD 
RAKVSLRFRG REMAHQELGM ELLKRVEGDL LEYGSVEQHP KMEGRQLIMV IAPKKKK