Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2371 |
Symbol | rbsK |
ID | 1184022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2622858 |
End bp | 2623778 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637393747 |
Product | ribokinase |
Protein accession | NP_792187 |
Protein GI | 28869568 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0559074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGCAA AAGTAGTGAT AGTGGGCAGT CTGAACATGG ATCTGGTCAT CCGCGCCCAG CGTTTGCCAC GCCCCGGTGA AACACTCAGC GGGGAAACCT TCGACACCGT GCCCGGCGGC AAAGGCGCCA ATCAGGCAGT TGCTGCGGCG CGCCTGGGTG CCAGCGTGGC AATGATCGGT TGCGTAGGCG CCGATGCCTA TGGGCAGCAA CTGCGGGCGG CGCTGCTGGC CGAGTGCATC GACTGCCAGG CGGTGACCGT CGTGGAGGGC GTCTCCACCG GCATTGCATC GATCGTGGTC GACGCCAACA GCCAGAATGC CATCGTCATT GTGGCTGGCG GCAATGGTCG GCTCACCCCG GCGCTGATCG AGCGTTTCGA TGCGTTGCTG GCAGGCTCCG AGATCGTTAT CTGTCAGTTG GAAGTCCCGA CTGAAACCGT TTTCCATACC CTGTCCAGGG CCCGTGCGCT GGGCAAGACC GTCATTCTCA ATCCGGCCCC GGCCAGCGAG CCATTGCCCG CAAGCTGGTA CGGCCTGATC GATTACCTGA TCCCCAACGA AAGCGAAGCG CAGACCCTGA CGGGTGTGAA TGTCGATTCA GCCGCCTCTG CCGAACAGGC TGCCATGGCA ATGCTGGCGG CCGGAGCGCG CAACGTGATC ATCACCCTCG GCGAGCGCGG CACTCTGTTC GCCAATGCCG CTGGCGTGGA GCATATTCCT GCGCGTCGTG TACAGGCCGT GGACACCACC GCTGCAGGTG ATACCTTTGT CGGTGGTTTT GCGGCAGCAC TGGCCGCTGG TCAGGGCGAG TCGCAAGCCA TTCGCTTCGG TCAGGCGGCG GCGGCCATAT CCGTCACCCG CGCGGGTGCC CAGCCGTCCA TACCGACGTT CGAGGAAGTA CAGGAACTCA ATTCGTTATG A
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Protein sequence | MQAKVVIVGS LNMDLVIRAQ RLPRPGETLS GETFDTVPGG KGANQAVAAA RLGASVAMIG CVGADAYGQQ LRAALLAECI DCQAVTVVEG VSTGIASIVV DANSQNAIVI VAGGNGRLTP ALIERFDALL AGSEIVICQL EVPTETVFHT LSRARALGKT VILNPAPASE PLPASWYGLI DYLIPNESEA QTLTGVNVDS AASAEQAAMA MLAAGARNVI ITLGERGTLF ANAAGVEHIP ARRVQAVDTT AAGDTFVGGF AAALAAGQGE SQAIRFGQAA AAISVTRAGA QPSIPTFEEV QELNSL
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