Gene PSPTO_2364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2364 
SymbolendA 
ID1184015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2616752 
End bp2617453 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content58% 
IMG OID637393740 
Productendonuclease I 
Protein accessionNP_792180 
Protein GI28869561 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.170845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTTC GATTTTTTGC ATTGTTTTGC ACCACCCTGC TCATCACCGC TTCACTCCCG 
GCCCAGGCCC AAGCCCCGCG TACATTCAGT GAAGCGAAGA AAGTCGCCTG GGGTTTGTAT
GCGCCGCAGT CGACCGAGTT TTACTGCGGC TGCAAATACA CCGGCAAGCG GGTCGATCTC
GCCGGCTGCG GCTATGTACC GCGCAAAAGC GCCAAGCGCG CCAGCCGCAT CGAATGGGAA
CACATCGTCC CGGCCTGGCA GATCGGCCAT CTGCGTCAGT GCTGGCAGAA CGGCGGTCGC
AAGAACTGCA CGAAGTCTGA CCCCGTTTAC AAACGCGCCG AAGCAGACCT GCACAATCTG
GTGCCCAGCA TCGGTGAGGT GAACGGTGAC CGCAGCAACT TCAGTTTTGG CTGGGTTCCC
GAGCAAAAAG GCCAGTACGG CTCATGCCTG ACTCAAGTGG ACTTCAAGGC CAAAAAGGTC
ATGCCGCGCC CATCGATACG CGGCATGATC GCGCGCACTT ATTTCTACAT GAGCAAGCAA
TACAACTTGC GCCTGTCGCG TCAGGATCAA CAGCTTTATC AGGCCTGGGA CAAGACCTAC
CCTCCCCAGA TCTGGGAGCG CCAGCGTAAC CAGCAGGTTG CCTGCGTAAT GGGGCGCGGT
AATGAGTTTG TCGGCCCGGT GGACTTGAAA GCGTGTAAAT AG
 
Protein sequence
MTFRFFALFC TTLLITASLP AQAQAPRTFS EAKKVAWGLY APQSTEFYCG CKYTGKRVDL 
AGCGYVPRKS AKRASRIEWE HIVPAWQIGH LRQCWQNGGR KNCTKSDPVY KRAEADLHNL
VPSIGEVNGD RSNFSFGWVP EQKGQYGSCL TQVDFKAKKV MPRPSIRGMI ARTYFYMSKQ
YNLRLSRQDQ QLYQAWDKTY PPQIWERQRN QQVACVMGRG NEFVGPVDLK ACK