Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2364 |
Symbol | endA |
ID | 1184015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2616752 |
End bp | 2617453 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637393740 |
Product | endonuclease I |
Protein accession | NP_792180 |
Protein GI | 28869561 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.170845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTTC GATTTTTTGC ATTGTTTTGC ACCACCCTGC TCATCACCGC TTCACTCCCG GCCCAGGCCC AAGCCCCGCG TACATTCAGT GAAGCGAAGA AAGTCGCCTG GGGTTTGTAT GCGCCGCAGT CGACCGAGTT TTACTGCGGC TGCAAATACA CCGGCAAGCG GGTCGATCTC GCCGGCTGCG GCTATGTACC GCGCAAAAGC GCCAAGCGCG CCAGCCGCAT CGAATGGGAA CACATCGTCC CGGCCTGGCA GATCGGCCAT CTGCGTCAGT GCTGGCAGAA CGGCGGTCGC AAGAACTGCA CGAAGTCTGA CCCCGTTTAC AAACGCGCCG AAGCAGACCT GCACAATCTG GTGCCCAGCA TCGGTGAGGT GAACGGTGAC CGCAGCAACT TCAGTTTTGG CTGGGTTCCC GAGCAAAAAG GCCAGTACGG CTCATGCCTG ACTCAAGTGG ACTTCAAGGC CAAAAAGGTC ATGCCGCGCC CATCGATACG CGGCATGATC GCGCGCACTT ATTTCTACAT GAGCAAGCAA TACAACTTGC GCCTGTCGCG TCAGGATCAA CAGCTTTATC AGGCCTGGGA CAAGACCTAC CCTCCCCAGA TCTGGGAGCG CCAGCGTAAC CAGCAGGTTG CCTGCGTAAT GGGGCGCGGT AATGAGTTTG TCGGCCCGGT GGACTTGAAA GCGTGTAAAT AG
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Protein sequence | MTFRFFALFC TTLLITASLP AQAQAPRTFS EAKKVAWGLY APQSTEFYCG CKYTGKRVDL AGCGYVPRKS AKRASRIEWE HIVPAWQIGH LRQCWQNGGR KNCTKSDPVY KRAEADLHNL VPSIGEVNGD RSNFSFGWVP EQKGQYGSCL TQVDFKAKKV MPRPSIRGMI ARTYFYMSKQ YNLRLSRQDQ QLYQAWDKTY PPQIWERQRN QQVACVMGRG NEFVGPVDLK ACK
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