Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2355 |
Symbol | |
ID | 1184006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2609648 |
End bp | 2611456 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637393731 |
Product | glutathione-regulated potassium-efflux system protein |
Protein accession | NP_792171 |
Protein GI | 28869552 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.14064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCATG AAGGCAGCCT GTTGCAGGCC GCGGTGGTGT TCTTACTCGC GGCGGTGCTG ACCGTGCCGC TGGCCAAGCG CCTGAAGCTG GGCGCTGTCA TCGGTTATTT GTTCGCGGGC GTGATCATCG GCCCCTCGGT GCTGGGGTTG ATTGGCGATA CGGAGAGTGT CAGCCATATT TCCGAACTCG GCGTGGTGCT GCTGTTGTTC ATCATTGGCC TGGAGCTGTC ACCGAAGCGC TTGTGGGTGA TGCGCAAAGC GGTGTTTGGC GTGGGCATGG CGCAAGTGAT GCTGACCGGG CTGGTGATCG GCGCAATCGC GCTGTTTGCC TTCGGCCAGT CACTGAACAC CGCGGTCATT CTCGGGCTGG GCCTGGCGCT GTCGTCCACC GCTTTCGGCC TGCAAAGCCT GGCAGAGCGC AAGCAGCTGA ATAGCCCGCA TGGGCGGATG GCGTTCGCGA TTCTGCTGTT TCAGGACATT GCCGCGATTC CGCTGATTGC CATGGTGCCG TTTCTGGCCG GCGCTGATCA CGCCATGAAC ACGGGTGAAA GCGTGAATCA TGGCCTGCGC GTGCTCGGCA GTATTGCCAT CGTGGTGATC GGCGGGCGCT ACCTGCTGCG CCCGGTGTTC CGGATTGTCG CCAAGACCAA AATCCAGGAA GTCTCGACTG CCACCGCCTT GCTGGTGGTA ATTGGTACGG CGTGGCTAAT GGAGCTGGTC GGCGTGTCGA TGGCGCTCGG CGCGTTTCTC GCGGGCCTGT TGCTGGCCGA TTCCGAATAC CGTCACGAGC TGGAAGCCCA GATCGAGCCG TTCAAGGGTC TGCTGCTGGG GCTGTTCTTT ATCAGCGTCG GCATGGGCGC CAACGTCGGC CTGTTGCTCA GCTCGCCGCT GGCGGTGCTG GGCCTGACCC TGCTGCTGAT CGCCATCAAG CTGCCGATGC TGTTCATCAT CGGTCGCACC GCGGGCGGCC TCAATAACCG CAGCGCATTG CAGTTGGGCC TGGTGCTGGC CGCCGGGGGC GAGTTTGCCT TTGTGGTGTT CAAGATCGGC AGCACGCAAG GGCTGTTCGA GGCCGGGCTG TACGACATGC TGGTGTTGAC CATTACCTTG TCGATGGCCA TTACCCCGTT GCTGTTCATT GCGCTGGCAC GCTGGATCAA GCCCAAGGCC AAGGTGGTGA ATGTGCCGGA CGAGTACCGC GACATTCAAA CCGACAAACC CCGAGTAGTG ATTGCCGGCA TGGGCCGTAT GGGGCAGATC GTCGCGCGGA TCCTGCGAGC GCAGAAAGTC CCTTTCATCG CCCTGGATAC CGCCGTGGAG TCGATTGAAT TCTCACGCAG TTTTGGCAAC GTGCCAGTGT TCTATGGCGA CCCGTTGCGC CCGGAAATAC TGCGTGCCGC CAAGGTCGAT GAAGCGCAAT ACTTTGTCAT CGCGACGGAT GATCCGGACA CCAACATCAA GACTGCCGAG TTGATCCGCA AGCTGTATCC GCACATGAAA ATCATCGCCC GCGCACGTAA CCGCCAGCAC GTTCACCGGC TGATGGACAT CGGCGCGCAT GCTGTGCGCG AGACGTTCTA TTCAAGCCTG GAAATGAGCC GTCAGACCTT GATGGGCCTG GGCCTGACCG AGGCGCAGGC CGATGCCCGC ATCAGCCGCT TCAAGCGTCA CGACGAACAG GTGCTGGCTG CCCAGCACGA AGTGTATGAC GACGACGCCA AGGTGCTGCA GACCGCCCGC GAAGCACGCG CCGATCTTGC GCAACTGTTC GAGGCGGACC GTCTGGACGA AGAAGCGGCC AAAGGCTGA
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Protein sequence | MPHEGSLLQA AVVFLLAAVL TVPLAKRLKL GAVIGYLFAG VIIGPSVLGL IGDTESVSHI SELGVVLLLF IIGLELSPKR LWVMRKAVFG VGMAQVMLTG LVIGAIALFA FGQSLNTAVI LGLGLALSST AFGLQSLAER KQLNSPHGRM AFAILLFQDI AAIPLIAMVP FLAGADHAMN TGESVNHGLR VLGSIAIVVI GGRYLLRPVF RIVAKTKIQE VSTATALLVV IGTAWLMELV GVSMALGAFL AGLLLADSEY RHELEAQIEP FKGLLLGLFF ISVGMGANVG LLLSSPLAVL GLTLLLIAIK LPMLFIIGRT AGGLNNRSAL QLGLVLAAGG EFAFVVFKIG STQGLFEAGL YDMLVLTITL SMAITPLLFI ALARWIKPKA KVVNVPDEYR DIQTDKPRVV IAGMGRMGQI VARILRAQKV PFIALDTAVE SIEFSRSFGN VPVFYGDPLR PEILRAAKVD EAQYFVIATD DPDTNIKTAE LIRKLYPHMK IIARARNRQH VHRLMDIGAH AVRETFYSSL EMSRQTLMGL GLTEAQADAR ISRFKRHDEQ VLAAQHEVYD DDAKVLQTAR EARADLAQLF EADRLDEEAA KG
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