Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2345 |
Symbol | |
ID | 1183996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2599195 |
End bp | 2600514 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637393722 |
Product | transporter, putative |
Protein accession | NP_792162 |
Protein GI | 28869543 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAATA CCCAGAACAA CCCTGTTACC CGTGCCGGGA TGGGCGAAAA GATTCGCGGC GCTCTTGCCG TGGGCAAGAC CCGCTGGGGC ATGCTTGCCC TGGTGTTCTT CGCGACTACG CTGAACTACA TCGACCGGGC GGCGCTCGGG GTCATGCAGC CGATACTGGC CAAGGAGATG AGCTGGACGG CGATGGATTA CGCCAACATC AACTTCTGGT TTCAGGTCGG CTACGCCGTC GGCTTCGTGC TGCAAGGCCG CTTCATCGAC AAGGTCGGCG TCAAGCGCGC GTTCTTCCTC GCCGTGCTGT TGTGGAGCCT GGCGACCGGC GCGCATGGCC TGGCGACGTC TGCGGTCGGC TTCATGGTCT GCCGCTTCAT TCTCGGCCTG ACCGAGGCGG CCAACTACCC GGCCTGCGTG AAAACCACGC GCCTGTGGTT CCCGGCCGGT GAGCGTGCGG TGGCGACTGG CATCTTCAAC GCTGGCACCA ACGTCGGTGC GATGCTGACG CCAGCGTTGC TGCCGCTGAT CCTCACTGTC TGGGGCTGGC AGGCAGCGTT CGTGGCGATG GGTTCGCTGG GGCTGATCTG GGTGATCATG TGGCGCTTGA AGTACTACAA CCCTGAAGAG CACCCGACCG TCAGCAAAAC CGAACTGGAC TACATCAATC AGGAGGTCGA GCCTGCGCCG GTCAAGGTGC CTTTCACCGG CATTCTGAAG ATGCGCGGCA CCTGGGCATT CGCGCTGGCT TACGCGATCA CCGCGCCAGT GTTCTGGTTC TACCTGTACT GGTTGCCGCC GTTTCTCAAT CAGCAATACA ACCTGGGCAT CAGCGTGACG CAGATGGGCA TCCCGCTGAT CCTGATCTGG CTGACCGCCG ACTTCGGCAG CGTGGGTGGC GGTATCCTGT CATCGTGGCT GATCGGGCGC GGCATGCGGG CGACCAAAGC GCGTCTGCTG TCAATGCTGA TATTCGCCAT CACCATCTGC AGCGTGGTGT TCGCCGCCAA CGCCAGCGGC TTGTGGGTCG CGGTGCTGGC CATCTCTGTG GCAGTCGGCG CGCATCAGGC CTGGACCGCG AACATCTGGA GCCTGGTGAT GGACTACACG CCCAAGCACA TGATGAGCAC GGTGTTCGGC TTCGGCGGCA TGTGCGCAGC CATCGGCGGC ATGTTCATGA CCCAGATCGT CGGTGCGGTG CTGACCGCGA CCAACAACAA TTACAACGTG TTGTTCACCA TGATCCCGGC GATGTACTTC ATCGCGCTGA TCTGGCTGTA CTTCATGGCT CCGCGCAAGG TGCCTACGCT GAGCGAGTAA
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Protein sequence | MLNTQNNPVT RAGMGEKIRG ALAVGKTRWG MLALVFFATT LNYIDRAALG VMQPILAKEM SWTAMDYANI NFWFQVGYAV GFVLQGRFID KVGVKRAFFL AVLLWSLATG AHGLATSAVG FMVCRFILGL TEAANYPACV KTTRLWFPAG ERAVATGIFN AGTNVGAMLT PALLPLILTV WGWQAAFVAM GSLGLIWVIM WRLKYYNPEE HPTVSKTELD YINQEVEPAP VKVPFTGILK MRGTWAFALA YAITAPVFWF YLYWLPPFLN QQYNLGISVT QMGIPLILIW LTADFGSVGG GILSSWLIGR GMRATKARLL SMLIFAITIC SVVFAANASG LWVAVLAISV AVGAHQAWTA NIWSLVMDYT PKHMMSTVFG FGGMCAAIGG MFMTQIVGAV LTATNNNYNV LFTMIPAMYF IALIWLYFMA PRKVPTLSE
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