Gene PSPTO_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2345 
Symbol 
ID1183996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2599195 
End bp2600514 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content62% 
IMG OID637393722 
Producttransporter, putative 
Protein accessionNP_792162 
Protein GI28869543 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAATA CCCAGAACAA CCCTGTTACC CGTGCCGGGA TGGGCGAAAA GATTCGCGGC 
GCTCTTGCCG TGGGCAAGAC CCGCTGGGGC ATGCTTGCCC TGGTGTTCTT CGCGACTACG
CTGAACTACA TCGACCGGGC GGCGCTCGGG GTCATGCAGC CGATACTGGC CAAGGAGATG
AGCTGGACGG CGATGGATTA CGCCAACATC AACTTCTGGT TTCAGGTCGG CTACGCCGTC
GGCTTCGTGC TGCAAGGCCG CTTCATCGAC AAGGTCGGCG TCAAGCGCGC GTTCTTCCTC
GCCGTGCTGT TGTGGAGCCT GGCGACCGGC GCGCATGGCC TGGCGACGTC TGCGGTCGGC
TTCATGGTCT GCCGCTTCAT TCTCGGCCTG ACCGAGGCGG CCAACTACCC GGCCTGCGTG
AAAACCACGC GCCTGTGGTT CCCGGCCGGT GAGCGTGCGG TGGCGACTGG CATCTTCAAC
GCTGGCACCA ACGTCGGTGC GATGCTGACG CCAGCGTTGC TGCCGCTGAT CCTCACTGTC
TGGGGCTGGC AGGCAGCGTT CGTGGCGATG GGTTCGCTGG GGCTGATCTG GGTGATCATG
TGGCGCTTGA AGTACTACAA CCCTGAAGAG CACCCGACCG TCAGCAAAAC CGAACTGGAC
TACATCAATC AGGAGGTCGA GCCTGCGCCG GTCAAGGTGC CTTTCACCGG CATTCTGAAG
ATGCGCGGCA CCTGGGCATT CGCGCTGGCT TACGCGATCA CCGCGCCAGT GTTCTGGTTC
TACCTGTACT GGTTGCCGCC GTTTCTCAAT CAGCAATACA ACCTGGGCAT CAGCGTGACG
CAGATGGGCA TCCCGCTGAT CCTGATCTGG CTGACCGCCG ACTTCGGCAG CGTGGGTGGC
GGTATCCTGT CATCGTGGCT GATCGGGCGC GGCATGCGGG CGACCAAAGC GCGTCTGCTG
TCAATGCTGA TATTCGCCAT CACCATCTGC AGCGTGGTGT TCGCCGCCAA CGCCAGCGGC
TTGTGGGTCG CGGTGCTGGC CATCTCTGTG GCAGTCGGCG CGCATCAGGC CTGGACCGCG
AACATCTGGA GCCTGGTGAT GGACTACACG CCCAAGCACA TGATGAGCAC GGTGTTCGGC
TTCGGCGGCA TGTGCGCAGC CATCGGCGGC ATGTTCATGA CCCAGATCGT CGGTGCGGTG
CTGACCGCGA CCAACAACAA TTACAACGTG TTGTTCACCA TGATCCCGGC GATGTACTTC
ATCGCGCTGA TCTGGCTGTA CTTCATGGCT CCGCGCAAGG TGCCTACGCT GAGCGAGTAA
 
Protein sequence
MLNTQNNPVT RAGMGEKIRG ALAVGKTRWG MLALVFFATT LNYIDRAALG VMQPILAKEM 
SWTAMDYANI NFWFQVGYAV GFVLQGRFID KVGVKRAFFL AVLLWSLATG AHGLATSAVG
FMVCRFILGL TEAANYPACV KTTRLWFPAG ERAVATGIFN AGTNVGAMLT PALLPLILTV
WGWQAAFVAM GSLGLIWVIM WRLKYYNPEE HPTVSKTELD YINQEVEPAP VKVPFTGILK
MRGTWAFALA YAITAPVFWF YLYWLPPFLN QQYNLGISVT QMGIPLILIW LTADFGSVGG
GILSSWLIGR GMRATKARLL SMLIFAITIC SVVFAANASG LWVAVLAISV AVGAHQAWTA
NIWSLVMDYT PKHMMSTVFG FGGMCAAIGG MFMTQIVGAV LTATNNNYNV LFTMIPAMYF
IALIWLYFMA PRKVPTLSE