| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2341 |
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| Symbol | pcaB |
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| ID | 1183992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2594472 |
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| End bp | 2595833 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637393718 |
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| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
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| Protein accession | NP_792158 |
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| Protein GI | 28869539 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAGAC CGAGCAATCA ACTGTTTGAT GCCTATTTCA CGCAGTCCGA TATGCGCGAC
ATTTTCTCGG ACGAAGGCCG GGTGCAGGGC ATGCTCGATT TCGAGGCTGC GCTGGCTCGG
GCGCAGGCGC GAGTCGGCCT GATCCCGCAA CAGGTCGTGG CTGATATCGA GCAGAGCTGC
CGCGCCGAGC TGTTCGATTT CGACGAACTG GCCATTGCCA TAGGCAGCGC CGGCAATTCG
GCGATCCCGT TGGTCAAGGC GCTCGGCAGG CAGATTGCTG CGCGCAACCC GCAAGCCGAG
CGTTACGTGC ACATGGGCGC GACCAGTCAG GACGTGATGG ACAGCGGGCT GGTGCTGCAA
ATACGCCGGG CGATCGTCTT GCTGGAGCGT GACCTTGCGC AACTGGCCAA GGCACTGGCT
GAACAGGCGC AGCGCCATGC TGCTACGCCG CTGGCCGGGC GCACCTGGTT GCAGCAGGCC
ACGCCGGTCA CGCTGGGGAT GAAAATCGCC GGTTGGCTGG GCGCCATCAC TCGCCATCGC
CAGCGCCTGA ACGAGATCAA ACCGCGCCTG CTGTGCCTGC AATTCGGCGG CGCGTCCGGC
AGCCTTGCGG CGCTGGGCGA CCGGGCCTTC CCGGTGGCGC AAGCACTGGC GGGTGAATTA
CAGCTGGAAC TGCCCGAGCA GCCCTGGCAC ACCCAGCGTG ATCGTCTGGT GGAGTTTGCC
AGCGTCCTGG GCCTGATCGC CGGCAGCCTC GGCAAGCTTG GGCGTGACGT CAGCCTGTTG
ATGCAGACCG AAGTGGGCGA GGTATTCGAG CCTTCCGCAC CGGGCAAAGG TGGCTCTTCG
ACCATGCCGC ACAAGCGCAA CCCGGTGGGT GCAGCGGTGA TGATCGGCGC AGCCACTCGG
GCACCGGGGC TGGTTGCGAC GATGCTGTCG GCCATGCCAC AGGAGCACGA GCGCAGCCTG
GGCCTGTGGC ACGCCGAGTG GGAAACCCTG CCTGAGCTGT GCTGCCTGGT GTCCGGTTCG
CTGCAACAGG CATTGCAGGT GATACCCGGT CTGCAAGTAG ACGCCGAGCG CATGCGGGTC
AATCTGGAAT CTACCCAAGG CCTGGTGCTG GCCGAAGCTG TGAGTATTGC GCTGGCCCAG
CGTATCGGCC GTGACGCGGC CCATCATCTG ATCGAACAAT GCTGTCGGCG TGCGGTGGAG
CAGGGCGCGC ATCTGCGTCA GGTGCTCGGC GACAACCCGC AGGTCAGCGA GCAACTTACT
TGCGCCGAGC TGGATCGCCT GCTCGATCCG GCCCATTACC TTGGCCAGGC CCGCCTGTGG
GTCGAACGTG CCGTGGCTGA ACACACAAGG ATTTCCCGAT GA
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| Protein sequence | MNRPSNQLFD AYFTQSDMRD IFSDEGRVQG MLDFEAALAR AQARVGLIPQ QVVADIEQSC
RAELFDFDEL AIAIGSAGNS AIPLVKALGR QIAARNPQAE RYVHMGATSQ DVMDSGLVLQ
IRRAIVLLER DLAQLAKALA EQAQRHAATP LAGRTWLQQA TPVTLGMKIA GWLGAITRHR
QRLNEIKPRL LCLQFGGASG SLAALGDRAF PVAQALAGEL QLELPEQPWH TQRDRLVEFA
SVLGLIAGSL GKLGRDVSLL MQTEVGEVFE PSAPGKGGSS TMPHKRNPVG AAVMIGAATR
APGLVATMLS AMPQEHERSL GLWHAEWETL PELCCLVSGS LQQALQVIPG LQVDAERMRV
NLESTQGLVL AEAVSIALAQ RIGRDAAHHL IEQCCRRAVE QGAHLRQVLG DNPQVSEQLT
CAELDRLLDP AHYLGQARLW VERAVAEHTR ISR
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