Gene PSPTO_2339 details

Gene Information

• Locus tag: PSPTO_2339
• Symbol: pcaG
• ID: 1183990
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 2592428
• End bp: 2593030
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637393716
• Product: protocatechuate 3,4-dioxygenase, alpha subunit
• Protein accession: NP_792156
• Protein GI: 28869537
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG3485] Protocatechuate 3,4-dioxygenase beta subunit
• TIGRFAM ID: [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.259589
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGTTC AATTGCTGCA GGAAACCCCT TCGCAAACCG CTGGCCCTTA CGTGCACATT 
GGCTTGGCCC CGCAAGTGGC CGGCAACCCG ACCCGCGAGC TGGAAATCTG GAACGAGATG 
GCCAGGCCCG AAGCGCCGGG TGAGCACATC GTGCTGCTGG GCAATGTCTT CGATGGCAAC 
GGCCACCTGA TTCGCGATGC CTATCTGGAG TTCTGGCAGG CCGATCATCA GGGCGTTTAT 
GACCACGAAT TTCATCCCGA CCGGCCGTTC AACGGCTTTG GCCGCACCGC AACCACCGAT 
GACGGTCAGT GGCTGTTGAA GGCCGTAAAA CCGGGCTCGG TGCGCAATGC GGCGGGTGTG 
CCGATGGCTG CGCATATTAA TGTGTCGCTG TTTGCCCGTG GCATCAATAT TCATCTGCAG 
ACGCGGTTGT ATTTCGATGA CGAAGCGCAG GCCAATGCCA TCGACCCGGT GCTGAACCTG 
ATCGAGCAGC CGCCGCGTCG CGAAACCCTG ATTGCGCGTC GTTGTACGCA CGAGGGCCAA 
TCGGCCTATC GTTTCGACAT CCGCGTGCAG GGTGAAGGCG AAACGGTGTT TTTCGATTTC 
TGA 

 

Protein sequence

MPVQLLQETP SQTAGPYVHI GLAPQVAGNP TRELEIWNEM ARPEAPGEHI VLLGNVFDGN 
GHLIRDAYLE FWQADHQGVY DHEFHPDRPF NGFGRTATTD DGQWLLKAVK PGSVRNAAGV 
PMAAHINVSL FARGINIHLQ TRLYFDDEAQ ANAIDPVLNL IEQPPRRETL IARRCTHEGQ 
SAYRFDIRVQ GEGETVFFDF