| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2338 |
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| Symbol | pcaH |
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| ID | 1183989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2591697 |
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| End bp | 2592416 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393715 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | NP_792155 |
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| Protein GI | 28869536 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.49232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCG TGGACAATAG CCGCTTTGTC ATTCGTGATC GAAACTGGCA CCCCAAAGCC
CTGACGCCTG ATTACAAGAC CTCTATCCTC CGTTCGCCGC GTCAGGCGCT GGTCAGTATT
CCGCAATCCA TTTCCGAAAC CACCGGGCCG GATTTCTCGC ATTTGCAGTT TGGCCAGCAC
GACAACGACC TGCTGCTCAA CTTCAACAAC GGCGGGCTGC CCATCGGCGA ACGCATTTTG
CTCGCCGGTC GGGTCTGTGA TCAGTACGGC AAACCGATTC CGCACACCCT GGTAGAGATC
TGGCAGGCCA ATGCCGGCGG GCGTTACCGT CACAAACGTG ATGCGTACCT GGCCCCGATC
GACCCCAATT TCGGCGGTGT CGGCCGCACC TTGACCGACA GCGAAGGCAA TTACAGCTTT
CGCACCGTCA AGCCGGGTCC GTACCCGTGG CGCAACGGCC CCAACGACTG GCGTCCGGCG
CACATTCACG TGTCGATCAG CGGCCCGTCG ATTGCCACGC GATTGATCAC CCAGCTGTAT
TTCGAAGGCG ATCCGTTGAT TCCGACCTGC CCGATCGTCA AGTCGATCAC CAACCCGGAT
GCGGTGCAGA GCCTGATCGC CCGGCTTGAT CTGGCACTGG GCAACCCGAT GGACTGCCTG
GCGTATCGCT TTGACATCGT GTTGCGCGGT CAGCGCAAGA CGCACTTCGA AAACTGCTGA
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| Protein sequence | MSAVDNSRFV IRDRNWHPKA LTPDYKTSIL RSPRQALVSI PQSISETTGP DFSHLQFGQH
DNDLLLNFNN GGLPIGERIL LAGRVCDQYG KPIPHTLVEI WQANAGGRYR HKRDAYLAPI
DPNFGGVGRT LTDSEGNYSF RTVKPGPYPW RNGPNDWRPA HIHVSISGPS IATRLITQLY
FEGDPLIPTC PIVKSITNPD AVQSLIARLD LALGNPMDCL AYRFDIVLRG QRKTHFENC
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