| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2312 |
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| Symbol | |
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| ID | 1183963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2560473 |
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| End bp | 2561996 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393691 |
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| Product | CHASE domain/PAS domain protein |
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| Protein accession | NP_792131 |
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| Protein GI | 28869512 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3614] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.693705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTACAGGT TTGTTCATCG TCCCCTAGGC AAATTACTGG CGAGTAGCTA TAACAGAACT
CATGGCCAGC CTGACGCTTC AGCAGCTTGG CGTCATGAGT TTCTGTTTAT GGTAGCAAGA
CGTTTCAGGC TCAGAGTGCT GAGCTTCATC AATGGCCAGC TCTCTGCGTG GCCAGTAGCG
GTTTTGGTAT TTCTGGTCGG AGCGGCGCTC ACCGTCATGT TGGCACTCGC TGACAACGAG
CTGTATCAGC GGCAGCTGCG TCAGCGCTTC GACATGTTGG CTGCGGAGCG CTTCAGCCGT
CTTCAGGAGC GTCTGGACCG TCAGGTCACC CGGCTCGATA CACTGGGCCG CTTCTTTGTC
TTTTCCCATC AGGTCGAACA GTCGGAATTC AACGGCTTTG TCGCTCCGTT GCTGCTCGGC
ACCCAGGCGT ATGCCTGGAA CCCCAAAGTG ACCCTGGCCG AGCGTTCTGC GTTTGAAGAG
CAGGCGCGTA AGGAAGGCGC CGCCGGGTAC GCCATCCGCG AGCTGGATGA GAACGGTGCA
CTAAAAGTGG CCGGTGTCCG GAATGAGTAT TTTCCGGTGC GGTTCATCCA GACCCTCAGC
AAAATCCCGG CACCGTCAGG TTTCGATGTG TTCTCCGAGC CGATCCGCCA TTGCGCGCTG
GAACGTGCGC GGCTGCTCAA GCGCATTGTC GCGACGCCGC GCATCAGCCT GCTGGCCCTG
GACCCTTCCG ACATCTACGG GATCCTGCTG GTCGCGCCGG TGTTCTCCTC TGAACGGCCA
TCTGAGCTCA GAGGGTATGT CTCTGCGGTG ATCAGCCTGG CGCAACTGAT GAGTGTCGGT
ACCGCCGAGC AGGACAACCT CGCAGTGACC ATGCTTGACC TCAGTTCGCC AGCAAAACCC
GAGCAGGTTT ACCAGTCGCC GATTGCCGGC CTGCACAATC AACTGTATGC CAGCAGCCTG
CTGAGCCTGG GCGACAGGGA TTATCTGGTT GAGGTTCGCC CTACGGAAAT TTTCAGCCTC
AGCAATCAGA CCATCATGCC GGGCCGGGTC CTGTGGCTTG GCGGGTTATT GAGCCTGATG
CTCAGTGCCT TGTTGTACAG CCTGATCAGC CAGCGCCAGC GCGCCTTGCA GCGTGTGGCG
CAACGCACCC GTGAGCTGCG CCAGCGCGAG CAGCAGTTGC GGGCCGCACA TGGGCAACTG
CGCAATGTGC TCGATGCCGC GACCGAAGTG GCAATCATCG CGACTGATCT GGACGGGCTG
ATCAACACCT TCAATGTCGG CGCCCAGAAA ATGCTCGGGT ACACCGAAGA AGATGTGGTG
GGCAAGCTGC GGCTCATGGA CCTCTATCAG TCCGCCGAAC TCGAGGCACG CGCGAGCGCC
CTGAGCAAAG ACCGTGGTCG GCCGATCAGC GCCTCGCAAC TTTGCCGTAC AGGACGGCAC
TCACCCGTCG CAGGAGTGGA CGCTGCAACG CAGCGACCGC AGCACGCTGG TGGTGGACAT
GCTGGTCACT GCCGTGCGCG ATGA
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| Protein sequence | MYRFVHRPLG KLLASSYNRT HGQPDASAAW RHEFLFMVAR RFRLRVLSFI NGQLSAWPVA
VLVFLVGAAL TVMLALADNE LYQRQLRQRF DMLAAERFSR LQERLDRQVT RLDTLGRFFV
FSHQVEQSEF NGFVAPLLLG TQAYAWNPKV TLAERSAFEE QARKEGAAGY AIRELDENGA
LKVAGVRNEY FPVRFIQTLS KIPAPSGFDV FSEPIRHCAL ERARLLKRIV ATPRISLLAL
DPSDIYGILL VAPVFSSERP SELRGYVSAV ISLAQLMSVG TAEQDNLAVT MLDLSSPAKP
EQVYQSPIAG LHNQLYASSL LSLGDRDYLV EVRPTEIFSL SNQTIMPGRV LWLGGLLSLM
LSALLYSLIS QRQRALQRVA QRTRELRQRE QQLRAAHGQL RNVLDAATEV AIIATDLDGL
INTFNVGAQK MLGYTEEDVV GKLRLMDLYQ SAELEARASA LSKDRGRPIS ASQLCRTGRH
SPVAGVDAAT QRPQHAGGGH AGHCRAR
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